Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AC025946.2-201ENST00000603398 234 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AC104662.1-201ENST00000604448 511 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AL080274.1-201ENST00000605565 220 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AL049781.1-201ENST00000623195 3585 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 SNORD115-7-201ENST00000365306 82 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-61P-201ENST00000365528 109 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AL592114.1-201ENST00000403842 483 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 ARL5AP1-201ENST00000418991 388 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 BEND7P1-201ENST00000422058 457 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 RPL30P3-201ENST00000424262 333 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC073063.1-201ENST00000434352 607 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 HMGB1P37-201ENST00000439613 609 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.635-201ENST00000459041 101 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC010683.1-201ENST00000473673 378 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC027575.1-201ENST00000481064 460 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC083904.1-201ENST00000487828 231 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.654-201ENST00000497848 106 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC017037.1-201ENST00000508460 471 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1038P-201ENST00000516516 104 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 IGLVIV-53-201ENST00000520107 367 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AP000889.2-201ENST00000532684 490 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC007458.1-201ENST00000542812 373 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC006270.2-201ENST00000578523 652 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC007566.2-201ENST00000603642 413 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC012443.1-201ENST00000605605 231 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AL390240.1-201ENST00000612950 384 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC008121.3-201ENST00000618726 433 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 uc_338.11-201ENST00000619132 160 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC103858.2-201ENST00000621471 543 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 AC119674.1-207ENST00000641355 633 ntBASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC44A3Q8N4M1 ZNF734P-201ENST00000419494 1534 ntBASIC3.9□□□□□ -1.78
SLC44A3Q8N4M1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.9□□□□□ -1.78
SLC44A3Q8N4M1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SLC44A3Q8N4M1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
SLC44A3Q8N4M1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SLC44A3Q8N4M1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-179P-201ENST00000363350 107 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 RNA5SP50-201ENST00000363731 107 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 SNORA24.1-201ENST00000384401 135 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 RN7SKP158-201ENST00000410453 326 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC245054.2-201ENST00000415639 319 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC005517.2-201ENST00000424673 553 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 MTND3P2-201ENST00000438452 342 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 SNORD105B-201ENST00000458770 79 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC090096.1-201ENST00000489168 390 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 FAM60DP-201ENST00000524174 632 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 COPS8P3-201ENST00000526024 482 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AL670379.11-201ENST00000604059 253 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AL670379.10-201ENST00000604330 253 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AP001330.4-201ENST00000604350 154 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AL670379.12-201ENST00000605291 253 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AC080078.3-201ENST00000605407 463 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 AL670379.9-201ENST00000605428 253 ntBASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC44A3Q8N4M1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms