Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RNU6-629P-201ENST00000384061 103 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RNU6-882P-201ENST00000391025 103 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AL606923.1-201ENST00000406616 190 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RPS29P4-201ENST00000414733 161 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC093578.1-201ENST00000415219 368 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RAC1P6-201ENST00000423911 575 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 HMGN2P31-201ENST00000432430 273 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 HSPD1P21-201ENST00000436541 245 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 IFNA20P-201ENST00000436840 528 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RN7SL432P-201ENST00000484057 298 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 HMGB1P22-201ENST00000505315 124 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 Y_RNA.675-201ENST00000516389 149 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RNU7-30P-201ENST00000516835 62 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RANP9-201ENST00000519957 271 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC087241.2-201ENST00000535801 324 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 SCOCP1-201ENST00000554676 349 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 PSMA3P-201ENST00000555485 635 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AL118558.2-201ENST00000556294 238 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC037471.2-201ENST00000564941 598 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 MIR5583-1-201ENST00000580941 59 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 SNORA62.6-201ENST00000606322 83 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC012314.7-201ENST00000619693 93 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC110801.1-201ENST00000623590 212 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 U6.114-201ENST00000636407 96 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 AC002546.1-201ENST00000588041 2504 ntBASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
C9orf139Q6ZV77 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 API5P2-201ENST00000397055 1498 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 UBE3AP2-201ENST00000429033 2259 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AL672296.1-201ENST00000427780 2158 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNU6-600P-201ENST00000362524 99 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNA5SP72-201ENST00000364442 117 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNU6-522P-201ENST00000364497 107 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNA5SP51-201ENST00000364750 119 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNU6-946P-201ENST00000383878 107 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNU6-701P-201ENST00000384059 107 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 MIR34B-201ENST00000385076 84 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC110754.1-201ENST00000399740 601 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RN7SKP32-201ENST00000410167 303 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 MTND3P8-201ENST00000412909 339 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC068533.1-201ENST00000418542 415 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 CYCSP4-201ENST00000429682 331 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AL365400.1-201ENST00000431854 640 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 HMGB3P22-202ENST00000451823 572 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AL590639.1-201ENST00000456484 337 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC007547.1-201ENST00000462177 490 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC084198.1-201ENST00000477747 402 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC103851.1-201ENST00000506833 274 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 MTCO3P9-201ENST00000506989 781 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 CCDC34P1-201ENST00000507441 517 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC108078.2-201ENST00000510750 236 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 RNU6-1073P-201ENST00000517182 106 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 SNORA31.22-201ENST00000517204 135 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC105029.1-201ENST00000520250 669 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC022695.1-201ENST00000522089 237 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC022690.1-201ENST00000526681 550 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC093027.1-201ENST00000546698 429 ntBASIC3.03□□□□□ -1.92
C9orf139Q6ZV77 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms