Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TMEM88Q6PEY1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM88Q6PEY1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 OR56B2P-202ENST00000641377 2453 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 Y_RNA.167-201ENST00000363735 109 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RN7SKP280-201ENST00000364196 304 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 SNORA75B-201ENST00000384053 137 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 Z98745.1-201ENST00000402553 494 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RN7SKP53-201ENST00000411337 315 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL645937.1-202ENST00000421799 937 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL353678.1-201ENST00000422735 741 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC092047.1-201ENST00000424997 240 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 ZNF863P-201ENST00000426746 417 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 DNAJC19P7-201ENST00000428811 344 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 SNRPEP4-201ENST00000435815 279 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC083863.1-201ENST00000438811 231 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL500522.2-201ENST00000448562 343 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 U3.44-201ENST00000458938 192 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RN7SL459P-201ENST00000481078 302 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC026979.1-201ENST00000492525 396 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC111000.3-201ENST00000508057 576 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC002456.2-201ENST00000509356 380 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC114781.4-201ENST00000513707 639 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RNU4-49P-201ENST00000516080 140 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RNU6-189P-201ENST00000516120 101 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RNU6-273P-201ENST00000516937 96 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 MIR5692A1-201ENST00000580523 69 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC008962.1-201ENST00000605729 304 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 Z82243.1-201ENST00000609432 473 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL121757.2-201ENST00000611223 313 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 MIR7703-201ENST00000620784 77 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 MAPK10-373ENST00000641983 6772 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 CUL1P1-201ENST00000509510 2425 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 AC090740.1-201ENST00000623193 2262 ntBASIC3.3□□□□□ -1.88
TMEM88Q6PEY1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 SNORD3E-201ENST00000362899 217 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC016397.1-201ENST00000412463 242 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC140479.3-201ENST00000418944 1126 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 ARL5AP1-201ENST00000418991 388 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 H2AFZP6-201ENST00000444403 394 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC012671.1-201ENST00000451912 203 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC026726.1-201ENST00000512859 601 ntBASIC3.29□□□□□ -1.88
TMEM88Q6PEY1 AC104136.1-201ENST00000512969 394 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms