Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
ATL3Q6DD88 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATL3Q6DD88 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATL3Q6DD88 SNORA23-201ENST00000365128 182 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 RNU6-723P-201ENST00000383973 107 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 U3.20-201ENST00000390909 217 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AL590084.2-201ENST00000401481 382 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 MTCO1P17-201ENST00000411522 491 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATL3Q6DD88 AL008987.1-201ENST00000415528 237 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.58□□□□□ -2
ATL3Q6DD88 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 RPL35AP22-201ENST00000436855 335 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 UBE2V1P13-201ENST00000436983 439 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 PAXBP1P1-201ENST00000449315 447 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.58□□□□□ -2
ATL3Q6DD88 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.58□□□□□ -2
ATL3Q6DD88 AC004924.1-201ENST00000480160 781 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AC096576.1-201ENST00000489014 359 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AC135721.1-201ENST00000497954 479 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 NRON-201ENST00000517270 370 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 RNU6-840P-201ENST00000517275 65 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.58□□□□□ -2
ATL3Q6DD88 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 AC068135.2-201ENST00000569293 1028 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.58□□□□□ -2
ATL3Q6DD88 NRBF2P5-201ENST00000603087 788 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 BCRP9-201ENST00000605312 388 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.58□□□□□ -2
ATL3Q6DD88 AP003485.2-201ENST00000623636 610 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AL356596.1-201ENST00000624230 379 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.58□□□□□ -2
ATL3Q6DD88 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.58□□□□□ -2
ATL3Q6DD88 AL138713.1-201ENST00000624026 2130 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
ATL3Q6DD88 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
ATL3Q6DD88 RNA5SP37-201ENST00000365420 130 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.57□□□□□ -2
ATL3Q6DD88 RNU1-39P-201ENST00000383897 165 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 U3.26-201ENST00000391236 204 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 MIR1305-201ENST00000408300 86 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 RNU6-516P-201ENST00000411381 104 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.57□□□□□ -2
ATL3Q6DD88 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.57□□□□□ -2
ATL3Q6DD88 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.57□□□□□ -2
ATL3Q6DD88 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.57□□□□□ -2
ATL3Q6DD88 MTCYBP3-201ENST00000445588 1137 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AL606662.1-201ENST00000445763 553 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
ATL3Q6DD88 RPS15AP27-201ENST00000449183 343 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.57□□□□□ -2
ATL3Q6DD88 LARP1BP2-201ENST00000486594 519 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 GZMAP1-201ENST00000503054 631 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC138853.1-201ENST00000503549 823 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 MTCYBP43-201ENST00000513621 740 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 RNA5SP200-201ENST00000516360 103 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC109329.2-201ENST00000519658 482 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
ATL3Q6DD88 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
ATL3Q6DD88 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC090888.1-201ENST00000561335 1141 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.57□□□□□ -2
ATL3Q6DD88 MIR4999-201ENST00000585029 91 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.57□□□□□ -2
ATL3Q6DD88 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.57□□□□□ -2
ATL3Q6DD88 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.57□□□□□ -2
ATL3Q6DD88 AC013244.3-201ENST00000605614 388 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 TUG1_2.1-201ENST00000614234 87 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC012150.2-201ENST00000621300 544 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 AC099063.3-201ENST00000642066 185 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
ATL3Q6DD88 AL359693.1-201ENST00000614959 2407 ntBASIC2.57□□□□□ -2
ATL3Q6DD88 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.56□□□□□ -2
ATL3Q6DD88 AL391994.1-201ENST00000254724 282 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 RNU6-853P-201ENST00000364306 107 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.56□□□□□ -2
ATL3Q6DD88 RPS24P7-201ENST00000416921 246 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 RPL22P18-201ENST00000417197 377 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.56□□□□□ -2
ATL3Q6DD88 AC009414.1-201ENST00000427200 443 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AL035407.1-201ENST00000429211 571 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.56□□□□□ -2
ATL3Q6DD88 RBM43P1-201ENST00000476891 1081 ntBASIC2.56□□□□□ -2
ATL3Q6DD88 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.56□□□□□ -2
ATL3Q6DD88 AC022447.3-201ENST00000506865 495 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms