Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNU6-33P-201ENST00000384793 107 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNU2-38P-201ENST00000410856 79 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RPS29P4-201ENST00000414733 161 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RPL21P90-201ENST00000415692 466 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 MTCO3P19-201ENST00000415864 321 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 ELOCP20-201ENST00000422460 345 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNA5SP49-201ENST00000516450 115 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.700-201ENST00000516806 100 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 AC104576.1-201ENST00000524225 88 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 AC006600.1-201ENST00000572529 153 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 OR1M4P-201ENST00000589199 287 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 MIR15A-201ENST00000607334 83 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 AC096772.1-201ENST00000609146 564 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 AC139769.1-204ENST00000472297 1931 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNA5SP453-201ENST00000362503 119 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU6-288P-201ENST00000363690 104 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU6-200P-201ENST00000364743 107 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU6-1093P-201ENST00000391194 107 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 AL445529.1-201ENST00000398713 389 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU2-43P-201ENST00000410306 190 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 BX842559.1-201ENST00000419615 532 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 COX6CP13-201ENST00000428703 226 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 AL590664.1-201ENST00000448065 339 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU6-237P-201ENST00000515985 71 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU6-406P-201ENST00000516470 107 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 RNU6-789P-201ENST00000517105 102 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 LRRC37A5P-203ENST00000580181 585 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 MIR3945-201ENST00000581853 98 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 MIR6133-201ENST00000617057 108 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 THAP12P5-201ENST00000405864 2275 ntBASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL13A1Q5TAT6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL13A1Q5TAT6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL13A1Q5TAT6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AC083843.2-201ENST00000568248 6253 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 RPL21P67-201ENST00000402896 478 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AL031121.1-201ENST00000406553 254 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 MIR548M-201ENST00000408260 86 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 HMGN2P27-201ENST00000427352 270 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 COX6B1P7-201ENST00000430845 235 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AL159987.2-201ENST00000432754 307 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AL353997.1-201ENST00000432936 108 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 MTND1P19-201ENST00000511780 315 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 RNU6-911P-201ENST00000516523 104 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 RNU6-182P-201ENST00000516970 105 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 RRN3P3-201ENST00000549207 578 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 GNRHR2P1-201ENST00000555315 631 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 SNORA74C-1-201ENST00000580726 201 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 RAC1P9-201ENST00000604990 392 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 MIR6500-201ENST00000622700 86 ntBASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL13A1Q5TAT6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL13A1Q5TAT6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.07□□□□□ -1.6
COL13A1Q5TAT6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL13A1Q5TAT6 Y_RNA.785-201ENST00000384290 109 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms