Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC092754.1-201ENST00000472975 479 ntBASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 FTH1P24-201ENST00000503502 462 ntBASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 APOOP4-201ENST00000513530 597 ntBASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 AC073869.8-201ENST00000641806 335 ntBASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 AC004817.4-201ENST00000602396 3625 ntBASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.86□□□□□ -1.63
RNFT1Q5M7Z0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AL079305.1-201ENST00000623159 3008 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 LINC01109-201ENST00000603837 3081 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 Y_RNA.337-201ENST00000365312 102 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 RNU6-381P-201ENST00000391259 108 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AL354868.1-201ENST00000417077 482 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AL451062.2-201ENST00000427515 271 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC005154.2-201ENST00000438110 379 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 Z82210.1-201ENST00000440037 231 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 RPS20P10-201ENST00000451209 253 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC005042.3-201ENST00000453230 174 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC009127.1-201ENST00000467090 155 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 RPL21P13-201ENST00000488305 481 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC104164.2-201ENST00000496953 495 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC107918.3-201ENST00000533272 382 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 NDUFA5P6-201ENST00000542110 379 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 MTND5P34-201ENST00000568888 325 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 U7.2-201ENST00000607576 63 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 AL450472.3-201ENST00000615578 367 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 U4.7-201ENST00000638126 106 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNFT1Q5M7Z0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AL138820.1-201ENST00000617901 5305 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 MIR412-201ENST00000362142 91 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 RNA5SP305-201ENST00000362665 119 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 RNU6-961P-201ENST00000363893 105 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 U3.10-201ENST00000364459 214 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 MIR135A2-201ENST00000384854 100 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 MIR550A3-201ENST00000390735 95 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 RNU6-578P-201ENST00000390980 103 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AL592045.1-201ENST00000429867 352 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC073850.1-201ENST00000449243 255 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 PPIAP21-201ENST00000464473 501 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 RPL21P126-201ENST00000470049 478 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AP000870.1-201ENST00000472927 406 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 MIR4700-201ENST00000578311 74 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC006272.2-201ENST00000594725 163 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC005176.2-201ENST00000596933 147 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC008121.1-201ENST00000603244 268 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC022441.3-201ENST00000605737 136 ntBASIC4.84□□□□□ -1.63
RNFT1Q5M7Z0 AC010632.3-201ENST00000611377 369 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms