Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 RNU6-2-201ENST00000384627 107 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RNU6-29P-201ENST00000384637 107 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RNU6-41P-201ENST00000384741 107 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 Y_RNA.569-201ENST00000384749 103 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RNU6-9-201ENST00000384776 107 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RNU6-239P-201ENST00000390990 99 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 AL591034.2-201ENST00000402839 359 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 CYCSP10-201ENST00000417973 294 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RPS12P23-201ENST00000419579 400 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 AC063976.4-201ENST00000421971 163 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 CYCSP43-201ENST00000438233 310 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 IGHV5-78-201ENST00000450948 295 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.58□□□□□ -1.52
NFX1Q12986 AP001025.1-201ENST00000486139 332 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 Y_RNA.677-201ENST00000516401 85 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RNA5SP230-201ENST00000517039 122 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.58□□□□□ -1.52
NFX1Q12986 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.58□□□□□ -1.52
NFX1Q12986 NDUFA5P6-201ENST00000542110 379 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.58□□□□□ -1.52
NFX1Q12986 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.58□□□□□ -1.52
NFX1Q12986 AC023824.2-201ENST00000566185 400 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RPL23AP84-201ENST00000571193 464 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 AL133393.1-201ENST00000603277 287 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 RNU6-6P-201ENST00000606623 107 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 AC240442.1-201ENST00000616055 283 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 MIR4496-201ENST00000635896 61 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 AL034549.2-201ENST00000618285 3373 ntBASIC5.58□□□□□ -1.52
NFX1Q12986 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NFX1Q12986 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFX1Q12986 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NFX1Q12986 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.58□□□□□ -1.52
NFX1Q12986 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFX1Q12986 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NFX1Q12986 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NFX1Q12986 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NFX1Q12986 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.57□□□□□ -1.52
NFX1Q12986 RNU6-512P-201ENST00000364438 103 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RNU6-294P-201ENST00000364999 102 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RNU4-11P-201ENST00000365287 132 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 Y_RNA.412-201ENST00000384001 104 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 Y_RNA.420-201ENST00000384043 110 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 SNORD63-201ENST00000384262 68 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.57□□□□□ -1.52
NFX1Q12986 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.57□□□□□ -1.52
NFX1Q12986 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.57□□□□□ -1.52
NFX1Q12986 AC074290.1-201ENST00000448883 135 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC010326.1-201ENST00000462726 602 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC006463.2-201ENST00000473326 348 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC022795.1-201ENST00000473808 480 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RPS27AP9-201ENST00000477681 438 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RPS29P24-201ENST00000486345 171 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 IGLV2-34-201ENST00000490007 283 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 RNA5SP43-201ENST00000516559 110 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RNU6-537P-201ENST00000517277 103 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC007458.1-201ENST00000542812 373 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.57□□□□□ -1.52
NFX1Q12986 MIR4330-201ENST00000579077 105 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RN7SL52P-201ENST00000584271 284 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 AC009318.2-201ENST00000610917 651 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RN7SL722P-201ENST00000617780 284 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 RN7SL565P-201ENST00000618246 284 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 MIR6839-201ENST00000620425 113 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 MIR1245B-201ENST00000636115 69 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.57□□□□□ -1.52
NFX1Q12986 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
NFX1Q12986 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.57□□□□□ -1.52
NFX1Q12986 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NFX1Q12986 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.57□□□□□ -1.52
NFX1Q12986 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.56□□□□□ -1.52
NFX1Q12986 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.56□□□□□ -1.52
NFX1Q12986 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NFX1Q12986 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.56□□□□□ -1.52
NFX1Q12986 RNA5SP223-201ENST00000365174 120 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 Y_RNA.623-201ENST00000411128 95 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 AC006946.1-201ENST00000429106 328 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.56□□□□□ -1.52
NFX1Q12986 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.56□□□□□ -1.52
NFX1Q12986 RN7SL738P-201ENST00000470264 297 ntBASIC5.56□□□□□ -1.52
NFX1Q12986 RPL21P103-201ENST00000479921 488 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms