Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 TRGVB-201ENST00000453257 471 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.46□□□□□ -2.18
CPSF1Q10570 AC104629.2-201ENST00000468627 598 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF1Q10570 DUXAP5-201ENST00000529668 529 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.46□□□□□ -2.18
CPSF1Q10570 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.46□□□□□ -2.18
CPSF1Q10570 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.46□□□□□ -2.18
CPSF1Q10570 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.46□□□□□ -2.18
CPSF1Q10570 AC106052.1-201ENST00000608029 497 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 AP005137.2-201ENST00000609238 400 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 AC079395.3-201ENST00000615161 484 ntBASIC1.46□□□□□ -2.18
CPSF1Q10570 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.46□□□□□ -2.18
CPSF1Q10570 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CPSF1Q10570 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CPSF1Q10570 RNU6-198P-201ENST00000384258 104 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 RNU6-167P-201ENST00000384292 106 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 MIR598-201ENST00000384868 97 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 U3.29-201ENST00000391296 212 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 RNU6-920P-201ENST00000410926 92 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.45□□□□□ -2.18
CPSF1Q10570 HMGN2P10-201ENST00000448085 265 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 AL500527.1-201ENST00000448532 255 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 SUMO2P6-201ENST00000505273 288 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.45□□□□□ -2.18
CPSF1Q10570 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF1Q10570 MTCYBP23-201ENST00000558717 1102 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 DPRXP5-201ENST00000604662 539 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 AC025594.3-201ENST00000613068 790 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 AC003001.2-201ENST00000616294 831 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.45□□□□□ -2.18
CPSF1Q10570 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CPSF1Q10570 SDAD1P2-201ENST00000441308 2028 ntBASIC1.45□□□□□ -2.18
CPSF1Q10570 RNU4-31P-201ENST00000384211 141 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 TXNP7-201ENST00000406296 293 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 AC092745.2-202ENST00000411880 369 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 RPL7L1P10-201ENST00000427790 463 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF1Q10570 AC004022.1-201ENST00000447766 1066 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF1Q10570 BX248409.1-201ENST00000455497 255 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 AC005410.1-202ENST00000460347 485 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
CPSF1Q10570 RNU7-193P-201ENST00000516723 65 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 MIR4504-201ENST00000577413 92 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.44□□□□□ -2.18
CPSF1Q10570 AC005034.5-201ENST00000604219 466 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 AC091304.6-201ENST00000619761 202 ntBASIC1.44□□□□□ -2.18
CPSF1Q10570 AC091812.1-201ENST00000432235 1948 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CPSF1Q10570 SNORA62.1-201ENST00000364287 154 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 RNA5SP450-201ENST00000411206 102 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 HMGN1P14-201ENST00000412459 517 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 RPS15AP38-201ENST00000413110 372 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 HMGB3P31-201ENST00000413333 595 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF1Q10570 RPS15AP27-201ENST00000449183 343 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 RNF138P1-201ENST00000502765 546 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 CBX3P3-201ENST00000508108 532 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AC093770.1-201ENST00000511559 571 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AC091965.2-201ENST00000512324 613 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 RNU4-18P-201ENST00000516751 149 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.43□□□□□ -2.18
CPSF1Q10570 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF1Q10570 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.43□□□□□ -2.18
CPSF1Q10570 SNORD114-21-201ENST00000606412 72 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AL449363.1-201ENST00000617815 186 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AC109454.4-201ENST00000623411 649 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 AL513185.3-201ENST00000433335 1300 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 MFSD8-213ENST00000641134 1327 ntBASIC1.43□□□□□ -2.18
CPSF1Q10570 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF1Q10570 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF1Q10570 AL590233.1-201ENST00000430017 456 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 Z80107.1-201ENST00000436830 412 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF1Q10570 RPL12P25-201ENST00000455592 494 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 AC108059.3-201ENST00000456388 214 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 PNPLA4P1-201ENST00000458328 305 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.42□□□□□ -2.18
CPSF1Q10570 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF1Q10570 AC074029.2-201ENST00000551045 634 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 AL049870.4-201ENST00000555741 486 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.42□□□□□ -2.18
CPSF1Q10570 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.42□□□□□ -2.18
CPSF1Q10570 AC123912.5-201ENST00000605470 343 ntBASIC1.42□□□□□ -2.18
CPSF1Q10570 RNA5SP325-201ENST00000363756 130 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 RNU4-38P-201ENST00000364472 129 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 MIR1285-1-201ENST00000408593 84 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 MTND4LP16-201ENST00000440828 295 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF1Q10570 RPL31P58-201ENST00000469001 379 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 PABPC1P3-201ENST00000469174 459 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.41□□□□□ -2.18
CPSF1Q10570 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.41□□□□□ -2.18
CPSF1Q10570 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.41□□□□□ -2.18
CPSF1Q10570 SNORA31.16-201ENST00000516773 139 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms