Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MTATP6P3-201ENST00000581686 676 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC011471.1-201ENST00000585766 187 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN2P57739 DPPA3P3-201ENST00000603842 430 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC034102.8-201ENST00000615146 484 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AP001486.3-201ENST00000615334 372 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC093648.1-201ENST00000623546 606 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CLDN2P57739 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CLDN2P57739 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN2P57739 CEP170P1-201ENST00000502249 4587 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC118273.1-201ENST00000525324 3006 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN2P57739 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN2P57739 RNA5SP374-201ENST00000362939 125 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN2P57739 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN2P57739 Y_RNA.554-201ENST00000384672 102 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 RNU2-9P-201ENST00000410194 145 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AC006028.1-201ENST00000438379 402 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN2P57739 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 AL357552.1-201ENST00000445254 415 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 Z99127.3-201ENST00000448158 395 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CLDN2P57739 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 RPL30P5-201ENST00000494923 336 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 RNU6-677P-201ENST00000516914 101 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 RN7SKP60-201ENST00000516985 239 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN2P57739 AC104383.1-201ENST00000530297 370 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 CBX3P5-201ENST00000552017 521 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AL512360.1-201ENST00000555346 234 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AC024619.4-201ENST00000580924 316 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AC013553.2-201ENST00000604244 589 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 AC007619.2-201ENST00000605743 379 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CLDN2P57739 uc_338.11-201ENST00000619132 160 ntBASIC3.31□□□□□ -1.88
CLDN2P57739 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN2P57739 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN2P57739 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN2P57739 TNPO1P3-201ENST00000436471 2662 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 ELF2P3-201ENST00000445099 1506 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN2P57739 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN2P57739 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN2P57739 Y_RNA.409-201ENST00000383990 98 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 SNORA24.1-201ENST00000384401 135 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 RNU6-14P-201ENST00000384630 106 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN2P57739 RNU6-1197P-201ENST00000391183 107 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 MIR548F1-201ENST00000408667 84 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 Z85995.1-201ENST00000415547 335 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 MRPL50P2-201ENST00000416821 482 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 AL671855.1-201ENST00000446875 1203 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC003071.1-201ENST00000451219 789 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 RNU7-63P-201ENST00000459054 62 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 RPL37P6-201ENST00000460682 294 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC083798.1-201ENST00000472671 131 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 RPL36AP51-201ENST00000487216 318 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC108078.2-201ENST00000510750 236 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC105417.1-201ENST00000514691 285 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 SNORA70.19-201ENST00000516717 90 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 RNA5SP291-201ENST00000517222 105 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN2P57739 OR5AQ1P-201ENST00000527596 927 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC027807.1-201ENST00000559921 996 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms