Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL603839.4-201ENST00000624658 1005 ntBASIC2.85□□□□□ -1.95
PEX3P56589 AL159972.1-201ENST00000625150 448 ntBASIC2.85□□□□□ -1.95
PEX3P56589 MIR4275-201ENST00000636486 87 ntBASIC2.85□□□□□ -1.95
PEX3P56589 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
PEX3P56589 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.85□□□□□ -1.95
PEX3P56589 AL136360.1-201ENST00000503377 1900 ntBASIC2.84□□□□□ -1.95
PEX3P56589 RNU4-1-201ENST00000363925 141 ntBASIC2.84□□□□□ -1.95
PEX3P56589 RNU5A-8P-201ENST00000364102 114 ntBASIC2.84□□□□□ -1.95
PEX3P56589 RNU4-91P-201ENST00000364778 135 ntBASIC2.84□□□□□ -1.95
PEX3P56589 SNORD116-1-201ENST00000384335 95 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AL109755.1-201ENST00000401791 649 ntBASIC2.84□□□□□ -1.95
PEX3P56589 RPS4XP8-201ENST00000402039 771 ntBASIC2.84□□□□□ -1.95
PEX3P56589 MIR1302-8-201ENST00000408342 128 ntBASIC2.84□□□□□ -1.95
PEX3P56589 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.84□□□□□ -1.95
PEX3P56589 AC005094.1-201ENST00000440420 368 ntBASIC2.84□□□□□ -1.95
PEX3P56589 PGBD4P3-201ENST00000440731 581 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AL590365.1-201ENST00000450788 243 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AL359385.1-201ENST00000456509 365 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC116337.2-201ENST00000477662 156 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.84□□□□□ -1.95
PEX3P56589 AC112204.1-201ENST00000502591 103 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.84□□□□□ -1.95
PEX3P56589 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.84□□□□□ -1.95
PEX3P56589 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.95
PEX3P56589 RNU4-29P-201ENST00000515943 174 ntBASIC2.84□□□□□ -1.95
PEX3P56589 RNU1-61P-201ENST00000516107 151 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC022616.6-201ENST00000520479 119 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.84□□□□□ -1.95
PEX3P56589 AC128657.1-201ENST00000549459 145 ntBASIC2.84□□□□□ -1.95
PEX3P56589 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.84□□□□□ -1.95
PEX3P56589 AP005205.1-201ENST00000563503 508 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.84□□□□□ -1.95
PEX3P56589 COX6CP3-201ENST00000580869 223 ntBASIC2.84□□□□□ -1.95
PEX3P56589 MIR3162-201ENST00000581818 82 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC010620.1-201ENST00000601088 1102 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.84□□□□□ -1.95
PEX3P56589 RPL12P50-201ENST00000603116 116 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AC004908.2-201ENST00000609090 574 ntBASIC2.84□□□□□ -1.95
PEX3P56589 OR10AB1P-201ENST00000609613 938 ntBASIC2.84□□□□□ -1.95
PEX3P56589 AL390240.1-201ENST00000612950 384 ntBASIC2.84□□□□□ -1.95
PEX3P56589 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.84□□□□□ -1.95
PEX3P56589 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.84□□□□□ -1.96
PEX3P56589 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PEX3P56589 AC090740.1-201ENST00000623193 2262 ntBASIC2.84□□□□□ -1.96
PEX3P56589 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.83□□□□□ -1.96
PEX3P56589 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.83□□□□□ -1.96
PEX3P56589 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PEX3P56589 RNA5SP68-201ENST00000363885 119 ntBASIC2.83□□□□□ -1.96
PEX3P56589 SNORA23-201ENST00000365128 182 ntBASIC2.83□□□□□ -1.96
PEX3P56589 RPL21P75-201ENST00000396599 483 ntBASIC2.83□□□□□ -1.96
PEX3P56589 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PEX3P56589 RPL21P28-201ENST00000401418 483 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AL592114.1-201ENST00000403842 483 ntBASIC2.83□□□□□ -1.96
PEX3P56589 MIR1289-1-201ENST00000408836 144 ntBASIC2.83□□□□□ -1.96
PEX3P56589 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
PEX3P56589 HMGN2P35-201ENST00000412164 270 ntBASIC2.83□□□□□ -1.96
PEX3P56589 NDUFB4P7-201ENST00000423198 363 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.83□□□□□ -1.96
PEX3P56589 AL592447.1-201ENST00000447592 540 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.83□□□□□ -1.96
PEX3P56589 RNU7-59P-201ENST00000459101 61 ntBASIC2.83□□□□□ -1.96
PEX3P56589 RPL21P39-201ENST00000463605 483 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC126389.1-201ENST00000477436 290 ntBASIC2.83□□□□□ -1.96
PEX3P56589 RPL21P93-201ENST00000480465 489 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC233702.1-201ENST00000482905 502 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC087190.1-201ENST00000484462 480 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC093591.1-201ENST00000491435 481 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.83□□□□□ -1.96
PEX3P56589 RPL21P16-201ENST00000495531 483 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC107934.1-201ENST00000522215 217 ntBASIC2.83□□□□□ -1.96
PEX3P56589 MTND4LP18-201ENST00000526864 291 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC022878.1-201ENST00000530684 149 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AP000907.2-201ENST00000530827 353 ntBASIC2.83□□□□□ -1.96
PEX3P56589 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.83□□□□□ -1.96
PEX3P56589 MIR4672-201ENST00000583126 81 ntBASIC2.83□□□□□ -1.96
PEX3P56589 PIGPP4-201ENST00000584447 307 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC068790.3-201ENST00000602988 553 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC112191.3-201ENST00000604371 277 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC007038.2-201ENST00000608095 740 ntBASIC2.83□□□□□ -1.96
PEX3P56589 Z69908.1-201ENST00000622603 247 ntBASIC2.83□□□□□ -1.96
PEX3P56589 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.83□□□□□ -1.96
PEX3P56589 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PEX3P56589 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.83□□□□□ -1.96
PEX3P56589 DDX10P1-201ENST00000448545 1933 ntBASIC2.83□□□□□ -1.96
PEX3P56589 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PEX3P56589 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PEX3P56589 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PEX3P56589 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PEX3P56589 FGF7P2-201ENST00000332473 296 ntBASIC2.82□□□□□ -1.96
PEX3P56589 RNU6-223P-201ENST00000362830 107 ntBASIC2.82□□□□□ -1.96
PEX3P56589 Y_RNA.77-201ENST00000362962 107 ntBASIC2.82□□□□□ -1.96
PEX3P56589 U3.4-201ENST00000363352 213 ntBASIC2.82□□□□□ -1.96
PEX3P56589 RNU1-39P-201ENST00000383897 165 ntBASIC2.82□□□□□ -1.96
PEX3P56589 RNU6-432P-201ENST00000384196 109 ntBASIC2.82□□□□□ -1.96
PEX3P56589 MIR514A1-201ENST00000385133 98 ntBASIC2.82□□□□□ -1.96
PEX3P56589 AL591034.1-201ENST00000407447 340 ntBASIC2.82□□□□□ -1.96
PEX3P56589 ATG3P1-201ENST00000419507 911 ntBASIC2.82□□□□□ -1.96
PEX3P56589 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.82□□□□□ -1.96
PEX3P56589 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 357.2 ms