Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP11P51784 RNY3P11-201ENST00000364153 102 ntBASIC4.95□□□□□ -1.62
USP11P51784 RNU6-200P-201ENST00000364743 107 ntBASIC4.95□□□□□ -1.62
USP11P51784 RNU6-214P-201ENST00000384130 107 ntBASIC4.95□□□□□ -1.62
USP11P51784 RNA5SP146-201ENST00000410743 123 ntBASIC4.95□□□□□ -1.62
USP11P51784 RN7SKP167-201ENST00000411047 285 ntBASIC4.95□□□□□ -1.62
USP11P51784 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.95□□□□□ -1.62
USP11P51784 RPS23P10-201ENST00000416185 486 ntBASIC4.95□□□□□ -1.62
USP11P51784 AC108032.1-201ENST00000416706 207 ntBASIC4.95□□□□□ -1.62
USP11P51784 RPS15AP40-201ENST00000419621 391 ntBASIC4.95□□□□□ -1.62
USP11P51784 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.95□□□□□ -1.62
USP11P51784 AC139712.2-201ENST00000424302 339 ntBASIC4.95□□□□□ -1.62
USP11P51784 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.95□□□□□ -1.62
USP11P51784 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.95□□□□□ -1.62
USP11P51784 RPL39P38-201ENST00000467018 153 ntBASIC4.95□□□□□ -1.62
USP11P51784 RN7SL303P-201ENST00000469773 251 ntBASIC4.95□□□□□ -1.62
USP11P51784 AC010631.1-201ENST00000474150 156 ntBASIC4.95□□□□□ -1.62
USP11P51784 RNU6-111P-201ENST00000517179 105 ntBASIC4.95□□□□□ -1.62
USP11P51784 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.95□□□□□ -1.62
USP11P51784 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.95□□□□□ -1.62
USP11P51784 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.95□□□□□ -1.62
USP11P51784 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.95□□□□□ -1.62
USP11P51784 AC110801.1-201ENST00000623590 212 ntBASIC4.95□□□□□ -1.62
USP11P51784 AC140479.6-201ENST00000633535 357 ntBASIC4.95□□□□□ -1.62
USP11P51784 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.95□□□□□ -1.62
USP11P51784 AC008669.1-201ENST00000565823 2178 ntBASIC4.95□□□□□ -1.62
USP11P51784 SCN1A-220ENST00000641603 12506 ntBASIC4.95□□□□□ -1.62
USP11P51784 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
USP11P51784 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
USP11P51784 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
USP11P51784 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
USP11P51784 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP11P51784 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
USP11P51784 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP11P51784 AL451142.2-201ENST00000429076 2090 ntBASIC4.94□□□□□ -1.62
USP11P51784 RNA5SP175-201ENST00000364275 119 ntBASIC4.94□□□□□ -1.62
USP11P51784 RNU4-42P-201ENST00000364738 142 ntBASIC4.94□□□□□ -1.62
USP11P51784 Y_RNA.518-201ENST00000384552 113 ntBASIC4.94□□□□□ -1.62
USP11P51784 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
USP11P51784 HDGFP1-201ENST00000405943 252 ntBASIC4.94□□□□□ -1.62
USP11P51784 RNU6-293P-201ENST00000411259 106 ntBASIC4.94□□□□□ -1.62
USP11P51784 AC092809.3-201ENST00000415453 231 ntBASIC4.94□□□□□ -1.62
USP11P51784 SYF2P2-201ENST00000417620 583 ntBASIC4.94□□□□□ -1.62
USP11P51784 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.94□□□□□ -1.62
USP11P51784 BX276092.3-201ENST00000424182 230 ntBASIC4.94□□□□□ -1.62
USP11P51784 RPL30P3-201ENST00000424262 333 ntBASIC4.94□□□□□ -1.62
USP11P51784 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.94□□□□□ -1.62
USP11P51784 RPL23AP33-201ENST00000442301 452 ntBASIC4.94□□□□□ -1.62
USP11P51784 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.94□□□□□ -1.62
USP11P51784 AC133473.1-201ENST00000455173 299 ntBASIC4.94□□□□□ -1.62
USP11P51784 RPL35AP15-201ENST00000468042 339 ntBASIC4.94□□□□□ -1.62
USP11P51784 RN7SL41P-201ENST00000476144 297 ntBASIC4.94□□□□□ -1.62
USP11P51784 SNORA25.11-201ENST00000515935 105 ntBASIC4.94□□□□□ -1.62
USP11P51784 Y_RNA.689-201ENST00000516589 107 ntBASIC4.94□□□□□ -1.62
USP11P51784 IGKV2D-23-201ENST00000518179 286 ntBASIC4.94□□□□□ -1.62
USP11P51784 IGLVIV-53-201ENST00000520107 367 ntBASIC4.94□□□□□ -1.62
USP11P51784 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.94□□□□□ -1.62
USP11P51784 TRAV8-5-201ENST00000537369 341 ntBASIC4.94□□□□□ -1.62
USP11P51784 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.94□□□□□ -1.62
USP11P51784 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.94□□□□□ -1.62
USP11P51784 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP11P51784 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.94□□□□□ -1.62
USP11P51784 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.94□□□□□ -1.62
USP11P51784 TUG1_2.1-201ENST00000614234 87 ntBASIC4.94□□□□□ -1.62
USP11P51784 AC011944.2-201ENST00000624440 683 ntBASIC4.94□□□□□ -1.62
USP11P51784 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP11P51784 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USP11P51784 SAGE4P-201ENST00000442271 3381 ntBASIC4.94□□□□□ -1.62
USP11P51784 MTND5P6-201ENST00000422338 1798 ntBASIC4.93□□□□□ -1.62
USP11P51784 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.93□□□□□ -1.62
USP11P51784 AC116667.1-201ENST00000604855 2072 ntBASIC4.93□□□□□ -1.62
USP11P51784 AL137003.2-201ENST00000606924 2538 ntBASIC4.93□□□□□ -1.62
USP11P51784 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USP11P51784 OR56A5-201ENST00000340110 738 ntBASIC4.93□□□□□ -1.62
USP11P51784 RNVU1-3-201ENST00000364313 161 ntBASIC4.93□□□□□ -1.62
USP11P51784 RNU6-1303P-201ENST00000364841 107 ntBASIC4.93□□□□□ -1.62
USP11P51784 MIR517A-201ENST00000385001 87 ntBASIC4.93□□□□□ -1.62
USP11P51784 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.93□□□□□ -1.62
USP11P51784 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.93□□□□□ -1.62
USP11P51784 AL157831.1-201ENST00000426134 473 ntBASIC4.93□□□□□ -1.62
USP11P51784 RPL23AP52-201ENST00000439311 478 ntBASIC4.93□□□□□ -1.62
USP11P51784 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.93□□□□□ -1.62
USP11P51784 RPS23P7-201ENST00000466210 444 ntBASIC4.93□□□□□ -1.62
USP11P51784 AC087385.1-201ENST00000475062 312 ntBASIC4.93□□□□□ -1.62
USP11P51784 RPL21P103-201ENST00000479921 488 ntBASIC4.93□□□□□ -1.62
USP11P51784 AC093852.1-201ENST00000503587 266 ntBASIC4.93□□□□□ -1.62
USP11P51784 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.93□□□□□ -1.62
USP11P51784 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.93□□□□□ -1.62
USP11P51784 AP003385.6-201ENST00000531603 374 ntBASIC4.93□□□□□ -1.62
USP11P51784 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
USP11P51784 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.93□□□□□ -1.62
USP11P51784 AC109446.1-201ENST00000566172 220 ntBASIC4.93□□□□□ -1.62
USP11P51784 ELOCP5-201ENST00000604924 333 ntBASIC4.93□□□□□ -1.62
USP11P51784 HMGN2P28-201ENST00000606102 262 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms