Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK7P50613 HMGB1P27-201ENST00000431429 603 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AL353705.1-201ENST00000433468 480 ntBASIC3.69□□□□□ -1.82
CDK7P50613 RPS20P5-201ENST00000434808 360 ntBASIC3.69□□□□□ -1.82
CDK7P50613 MTND1P4-201ENST00000435196 415 ntBASIC3.69□□□□□ -1.82
CDK7P50613 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK7P50613 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AC117522.1-201ENST00000509821 380 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AC105914.1-201ENST00000511798 226 ntBASIC3.69□□□□□ -1.82
CDK7P50613 RNU6-1092P-201ENST00000516955 87 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK7P50613 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK7P50613 AC005476.1-201ENST00000554427 397 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK7P50613 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.69□□□□□ -1.82
CDK7P50613 AL162713.1-201ENST00000604480 262 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AP002360.4-201ENST00000606980 481 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AC093732.2-201ENST00000607950 274 ntBASIC3.69□□□□□ -1.82
CDK7P50613 U6atac.1-201ENST00000616025 117 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AC139792.3-201ENST00000623525 224 ntBASIC3.69□□□□□ -1.82
CDK7P50613 AL157786.1-207ENST00000627771 695 ntBASIC3.69□□□□□ -1.82
CDK7P50613 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK7P50613 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK7P50613 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.69□□□□□ -1.82
CDK7P50613 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK7P50613 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDK7P50613 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK7P50613 PWAR6-201ENST00000552334 4618 ntBASIC3.68□□□□□ -1.82
CDK7P50613 RNU1-140P-201ENST00000365040 165 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK7P50613 MIR558-201ENST00000384920 94 ntBASIC3.68□□□□□ -1.82
CDK7P50613 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDK7P50613 RNU6-328P-201ENST00000390887 106 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.68□□□□□ -1.82
CDK7P50613 MTATP6P18-201ENST00000417994 673 ntBASIC3.68□□□□□ -1.82
CDK7P50613 RPL27AP8-201ENST00000424277 446 ntBASIC3.68□□□□□ -1.82
CDK7P50613 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.68□□□□□ -1.82
CDK7P50613 C8orf59P1-201ENST00000429930 303 ntBASIC3.68□□□□□ -1.82
CDK7P50613 HMGB1P12-201ENST00000438594 598 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AC107083.1-201ENST00000439643 279 ntBASIC3.68□□□□□ -1.82
CDK7P50613 DNAJC19P4-201ENST00000440115 345 ntBASIC3.68□□□□□ -1.82
CDK7P50613 MTND4P25-201ENST00000441039 533 ntBASIC3.68□□□□□ -1.82
CDK7P50613 NEFMP1-201ENST00000443423 1006 ntBASIC3.68□□□□□ -1.82
CDK7P50613 Z99127.3-201ENST00000448158 395 ntBASIC3.68□□□□□ -1.82
CDK7P50613 CEACAMP4-201ENST00000457676 421 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.68□□□□□ -1.82
CDK7P50613 RN7SL429P-201ENST00000479090 223 ntBASIC3.68□□□□□ -1.82
CDK7P50613 RN7SL489P-201ENST00000486185 223 ntBASIC3.68□□□□□ -1.82
CDK7P50613 RN7SL327P-201ENST00000488659 223 ntBASIC3.68□□□□□ -1.82
CDK7P50613 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 SNORA70.16-201ENST00000516390 95 ntBASIC3.68□□□□□ -1.82
CDK7P50613 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
CDK7P50613 HIGD1AP1-201ENST00000550979 275 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AC034105.3-201ENST00000565294 442 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK7P50613 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.68□□□□□ -1.82
CDK7P50613 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.68□□□□□ -1.82
CDK7P50613 AC107304.1-201ENST00000604229 296 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AL158032.1-201ENST00000605401 106 ntBASIC3.68□□□□□ -1.82
CDK7P50613 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
CDK7P50613 RN7SL853P-201ENST00000617250 223 ntBASIC3.68□□□□□ -1.82
CDK7P50613 U6.114-201ENST00000636407 96 ntBASIC3.68□□□□□ -1.82
CDK7P50613 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDK7P50613 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CDK7P50613 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.67□□□□□ -1.82
CDK7P50613 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK7P50613 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK7P50613 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK7P50613 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK7P50613 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDK7P50613 RNU6-1085P-201ENST00000363576 107 ntBASIC3.67□□□□□ -1.82
CDK7P50613 RNU6-288P-201ENST00000363690 104 ntBASIC3.67□□□□□ -1.82
CDK7P50613 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.67□□□□□ -1.82
CDK7P50613 RNU4-12P-201ENST00000365233 139 ntBASIC3.67□□□□□ -1.82
CDK7P50613 RNU6-108P-201ENST00000365558 107 ntBASIC3.67□□□□□ -1.82
CDK7P50613 Y_RNA.381-201ENST00000365666 102 ntBASIC3.67□□□□□ -1.82
CDK7P50613 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDK7P50613 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDK7P50613 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDK7P50613 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK7P50613 MED13P1-201ENST00000428342 171 ntBASIC3.67□□□□□ -1.82
CDK7P50613 AL590383.1-201ENST00000428602 75 ntBASIC3.67□□□□□ -1.82
CDK7P50613 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
CDK7P50613 MTATP6P13-201ENST00000438531 667 ntBASIC3.67□□□□□ -1.82
CDK7P50613 MTATP6P30-201ENST00000443540 664 ntBASIC3.67□□□□□ -1.82
CDK7P50613 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK7P50613 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK7P50613 AC009646.1-201ENST00000510455 318 ntBASIC3.67□□□□□ -1.82
CDK7P50613 APOOP4-201ENST00000513530 597 ntBASIC3.67□□□□□ -1.82
CDK7P50613 RNU6-1256P-201ENST00000516539 103 ntBASIC3.67□□□□□ -1.82
CDK7P50613 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDK7P50613 OR5G4P-201ENST00000525251 760 ntBASIC3.67□□□□□ -1.82
CDK7P50613 AP001893.2-201ENST00000526949 202 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms