Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.35□□□□□ -1.39
PRIM1P49642 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.35□□□□□ -1.39
PRIM1P49642 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.35□□□□□ -1.39
PRIM1P49642 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRIM1P49642 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
PRIM1P49642 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.34□□□□□ -1.39
PRIM1P49642 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRIM1P49642 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.34□□□□□ -1.39
PRIM1P49642 Y_RNA.405-201ENST00000383979 100 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 RNU6-76P-201ENST00000384060 104 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 Y_RNA.451-201ENST00000384200 100 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 Y_RNA.524-201ENST00000384564 100 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 Y_RNA.561-201ENST00000384694 100 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 RNU6-417P-201ENST00000384712 107 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PRIM1P49642 RPL21P67-201ENST00000402896 478 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.34□□□□□ -1.39
PRIM1P49642 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PRIM1P49642 NDUFB4P11-201ENST00000560510 395 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 AC040958.1-201ENST00000561102 201 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 AC090617.3-201ENST00000573670 475 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 AL022401.1-201ENST00000619498 108 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 AC019206.1-201ENST00000621938 425 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.34□□□□□ -1.39
PRIM1P49642 MTND1P7-201ENST00000632801 297 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 Z99571.1-201ENST00000636677 394 ntBASIC6.34□□□□□ -1.39
PRIM1P49642 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRIM1P49642 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
PRIM1P49642 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.34□□□□□ -1.39
PRIM1P49642 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PRIM1P49642 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PRIM1P49642 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PRIM1P49642 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.34□□□□□ -1.39
PRIM1P49642 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PRIM1P49642 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
PRIM1P49642 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PRIM1P49642 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRIM1P49642 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRIM1P49642 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.33□□□□□ -1.4
PRIM1P49642 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRIM1P49642 RNU6-827P-201ENST00000365553 106 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 Y_RNA.435-201ENST00000384095 112 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 RNU6-22P-201ENST00000384355 107 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 Y_RNA.590-201ENST00000410140 107 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 COX5BP7-201ENST00000414780 274 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 CYCSP10-201ENST00000417973 294 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 AL451062.2-201ENST00000427515 271 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 COX6CP13-201ENST00000428703 226 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 RPL7AP49-201ENST00000429522 581 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 AL591438.1-201ENST00000433508 581 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 RPL19P16-201ENST00000433839 588 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.33□□□□□ -1.4
PRIM1P49642 AC087477.1-201ENST00000465747 340 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.33□□□□□ -1.4
PRIM1P49642 Y_RNA.679-201ENST00000516416 91 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 RNU6-612P-201ENST00000516909 102 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 AC008489.1-201ENST00000524271 483 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.33□□□□□ -1.4
PRIM1P49642 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.33□□□□□ -1.4
PRIM1P49642 AC007458.1-201ENST00000542812 373 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.33□□□□□ -1.4
PRIM1P49642 MIR4659A-201ENST00000580269 81 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 AC091953.5-201ENST00000622919 233 ntBASIC6.33□□□□□ -1.4
PRIM1P49642 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PRIM1P49642 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.33□□□□□ -1.4
PRIM1P49642 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRIM1P49642 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PRIM1P49642 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 RNA5SP388-201ENST00000362584 119 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-37P-201ENST00000362692 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-11P-201ENST00000364234 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-7-201ENST00000364784 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-8-201ENST00000365467 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-25P-201ENST00000383873 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-1-201ENST00000383898 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-36P-201ENST00000384172 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-4P-201ENST00000384205 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-5P-201ENST00000384238 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-3P-201ENST00000384314 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-937P-201ENST00000384325 106 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-16P-201ENST00000384385 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-15P-201ENST00000384534 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-2-201ENST00000384627 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-29P-201ENST00000384637 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RNU6-9-201ENST00000384776 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.32□□□□□ -1.4
PRIM1P49642 HSPD1P21-201ENST00000436541 245 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC000111.2-201ENST00000448200 210 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC007395.1-201ENST00000451333 677 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 HSPE1P25-201ENST00000455484 251 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 NIP7P2-201ENST00000485801 544 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 RN7SL441P-201ENST00000492388 296 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC022493.1-201ENST00000492984 337 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC093840.1-201ENST00000511599 336 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.32□□□□□ -1.4
PRIM1P49642 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC6.32□□□□□ -1.4
PRIM1P49642 MRPS18CP4-201ENST00000535821 231 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC133555.2-201ENST00000550213 292 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC023575.1-201ENST00000580510 358 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms