Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC096664.2-201ENST00000411843 406 ntBASIC4.54□□□□□ -1.68
CCNFP41002 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNFP41002 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNFP41002 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNFP41002 FTH1P25-201ENST00000447665 469 ntBASIC4.54□□□□□ -1.68
CCNFP41002 RPL23AP31-201ENST00000456160 467 ntBASIC4.54□□□□□ -1.68
CCNFP41002 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNFP41002 AC008571.1-201ENST00000467232 300 ntBASIC4.54□□□□□ -1.68
CCNFP41002 AC092451.1-201ENST00000480211 153 ntBASIC4.54□□□□□ -1.68
CCNFP41002 CEACAMP10-202ENST00000495431 496 ntBASIC4.54□□□□□ -1.68
CCNFP41002 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNFP41002 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNFP41002 VWA8P1-201ENST00000510889 176 ntBASIC4.54□□□□□ -1.68
CCNFP41002 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNFP41002 OR7H2P-201ENST00000513483 306 ntBASIC4.54□□□□□ -1.68
CCNFP41002 MTCO2P24-201ENST00000515611 426 ntBASIC4.54□□□□□ -1.68
CCNFP41002 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.54□□□□□ -1.68
CCNFP41002 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNFP41002 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNFP41002 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.54□□□□□ -1.68
CCNFP41002 AC005899.2-201ENST00000584353 90 ntBASIC4.54□□□□□ -1.68
CCNFP41002 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.54□□□□□ -1.68
CCNFP41002 AC092447.9-201ENST00000603395 144 ntBASIC4.54□□□□□ -1.68
CCNFP41002 AC090425.1-201ENST00000610007 140 ntBASIC4.54□□□□□ -1.68
CCNFP41002 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNFP41002 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCNFP41002 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNFP41002 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCNFP41002 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNFP41002 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNFP41002 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCNFP41002 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
CCNFP41002 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCNFP41002 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCNFP41002 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCNFP41002 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CCNFP41002 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNFP41002 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNFP41002 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CCNFP41002 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 AL590240.1-201ENST00000334118 313 ntBASIC4.53□□□□□ -1.68
CCNFP41002 Y_RNA.47-201ENST00000362697 108 ntBASIC4.53□□□□□ -1.68
CCNFP41002 Y_RNA.389-201ENST00000383924 113 ntBASIC4.53□□□□□ -1.68
CCNFP41002 RNU6-26P-201ENST00000383985 107 ntBASIC4.53□□□□□ -1.68
CCNFP41002 RNU6-842P-201ENST00000384269 107 ntBASIC4.53□□□□□ -1.68
CCNFP41002 MIR514A1-201ENST00000385133 98 ntBASIC4.53□□□□□ -1.68
CCNFP41002 MIR548F4-201ENST00000408515 105 ntBASIC4.53□□□□□ -1.68
CCNFP41002 SNORA74C-2-201ENST00000411179 201 ntBASIC4.53□□□□□ -1.68
CCNFP41002 RNA5SP39-201ENST00000411245 120 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AL732292.1-201ENST00000426692 226 ntBASIC4.53□□□□□ -1.68
CCNFP41002 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNFP41002 AL049745.1-201ENST00000433953 286 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNFP41002 NDUFS5P3-201ENST00000450668 321 ntBASIC4.53□□□□□ -1.68
CCNFP41002 RPL7P5-201ENST00000471472 736 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AC128713.1-201ENST00000471495 306 ntBASIC4.53□□□□□ -1.68
CCNFP41002 RPS29P22-201ENST00000472363 168 ntBASIC4.53□□□□□ -1.68
CCNFP41002 S100A11P1-201ENST00000477525 312 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AC068781.1-201ENST00000488231 618 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AC078918.1-201ENST00000498515 228 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNFP41002 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 AC009643.1-201ENST00000532030 391 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNFP41002 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.53□□□□□ -1.68
CCNFP41002 RPL23AP97-201ENST00000568955 471 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNFP41002 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.53□□□□□ -1.68
CCNFP41002 AC098826.3-201ENST00000603823 466 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AL161616.1-201ENST00000611867 286 ntBASIC4.53□□□□□ -1.68
CCNFP41002 AL138721.1-201ENST00000616756 179 ntBASIC4.53□□□□□ -1.68
CCNFP41002 U3.53-201ENST00000628922 216 ntBASIC4.53□□□□□ -1.68
CCNFP41002 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.53□□□□□ -1.68
CCNFP41002 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCNFP41002 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCNFP41002 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.53□□□□□ -1.68
CCNFP41002 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCNFP41002 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CCNFP41002 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCNFP41002 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 Y_RNA.80-201ENST00000362996 102 ntBASIC4.52□□□□□ -1.69
CCNFP41002 RNU6-1167P-201ENST00000363227 94 ntBASIC4.52□□□□□ -1.69
CCNFP41002 RNU6-238P-201ENST00000363313 106 ntBASIC4.52□□□□□ -1.69
CCNFP41002 Y_RNA.324-201ENST00000365165 102 ntBASIC4.52□□□□□ -1.69
CCNFP41002 Y_RNA.485-201ENST00000384395 102 ntBASIC4.52□□□□□ -1.69
CCNFP41002 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 RNU6-55P-201ENST00000411092 107 ntBASIC4.52□□□□□ -1.69
CCNFP41002 HMGB3P2-201ENST00000411913 584 ntBASIC4.52□□□□□ -1.69
CCNFP41002 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCNFP41002 DPH3P2-201ENST00000422618 250 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms