Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 RNU6-248P-201ENST00000410720 107 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC9P31274 UBE2FP1-201ENST00000416536 447 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 RPS15AP12-201ENST00000419498 388 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 PGBD4P3-201ENST00000440731 581 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC9P31274 AL590639.1-201ENST00000456484 337 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 TPT1P7-201ENST00000458300 517 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC9P31274 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC9P31274 AC022483.1-201ENST00000514020 567 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC9P31274 SNORA9.3-201ENST00000516383 129 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 RNA5SP24-201ENST00000516478 95 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 HMGN1P28-201ENST00000521340 364 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC107934.1-201ENST00000522215 217 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AP000857.1-201ENST00000532151 543 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC9P31274 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC9P31274 AL391156.1-201ENST00000554965 554 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AL133153.1-201ENST00000557756 303 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 MIR4528-201ENST00000577763 90 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 MIR3146-201ENST00000580367 79 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC9P31274 AC110741.2-201ENST00000605278 268 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC004067.1-201ENST00000608733 700 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 BX664608.1-201ENST00000610519 487 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC104073.3-201ENST00000610942 955 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC084782.3-201ENST00000612282 578 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 MIR6130-201ENST00000619419 109 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 AC064859.1-201ENST00000624741 174 ntBASIC3.47□□□□□ -1.85
HOXC9P31274 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC9P31274 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
HOXC9P31274 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC9P31274 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC9P31274 RNU5A-8P-201ENST00000364102 114 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 SNORA70B-201ENST00000384210 135 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 SNORA36C-201ENST00000384289 132 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 SNORD116-4-201ENST00000384733 96 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 MIR27B-201ENST00000385129 97 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 RNU4-65P-201ENST00000410473 140 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 MTND1P21-201ENST00000412991 285 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC9P31274 AL589872.1-201ENST00000426602 288 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 ISCA1P6-201ENST00000427740 390 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC9P31274 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC9P31274 USP9YP14-201ENST00000430663 563 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC090774.1-201ENST00000435925 246 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 TIMM9P1-201ENST00000436122 256 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 RPL35AP22-201ENST00000436855 335 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC9P31274 AL662791.1-201ENST00000441992 928 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 RPL23AP14-201ENST00000468281 468 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXC9P31274 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC9P31274 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC9P31274 AC114797.1-201ENST00000514003 728 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC9P31274 Y_RNA.672-201ENST00000516289 104 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 RNU2-46P-201ENST00000517038 113 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC9P31274 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HOXC9P31274 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC9P31274 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC9P31274 MIR3118-1-201ENST00000581787 76 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC087683.1-201ENST00000591187 441 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC136601.2-201ENST00000604356 474 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC007621.1-201ENST00000604544 437 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC012443.1-201ENST00000605605 231 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC9P31274 AL136313.1-201ENST00000624804 202 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 AL138713.1-201ENST00000624026 2130 ntBASIC3.46□□□□□ -1.86
HOXC9P31274 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC9P31274 U8.3-201ENST00000363321 132 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXC9P31274 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC9P31274 AC119618.1-201ENST00000434191 222 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 AC073614.1-201ENST00000438690 650 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 GAPDHP17-201ENST00000449858 1001 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC9P31274 RNU7-59P-201ENST00000459101 61 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 RPS15AP36-201ENST00000492022 382 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC9P31274 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 AC109464.2-201ENST00000510242 943 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AP003392.2-201ENST00000527269 208 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXC9P31274 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC9P31274 AC104984.5-201ENST00000586878 94 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AC090578.1-201ENST00000604955 591 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 AC245517.5-201ENST00000611529 162 ntBASIC3.45□□□□□ -1.86
HOXC9P31274 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms