Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 RFPL4AP5-201ENST00000514977 504 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RNU6-864P-201ENST00000516256 108 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 SNORD27.1-201ENST00000516319 72 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RNU6-1220P-201ENST00000517126 108 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 BTF3P12-201ENST00000519620 469 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 MTND4P7-201ENST00000523876 130 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.94□□□□□ -1.78
POLR2AP24928 MAGOH2P-202ENST00000584384 429 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AL732372.2-225ENST00000642124 456 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC011978.2-201ENST00000569835 2054 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC139713.2-215ENST00000641428 5037 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC005332.5-201ENST00000591222 2919 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RNU6-522P-201ENST00000364497 107 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 U3.12-201ENST00000364498 214 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RHOT1P2-201ENST00000366423 333 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
POLR2AP24928 U3.20-201ENST00000390909 217 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 Y_RNA.579-201ENST00000390939 94 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AL359634.1-202ENST00000404721 284 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RPS12P24-201ENST00000412619 387 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RPS15AP12-201ENST00000419498 388 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RPL31P45-201ENST00000419532 356 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.94□□□□□ -1.78
POLR2AP24928 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.94□□□□□ -1.78
POLR2AP24928 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC243772.1-201ENST00000451620 410 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RPS29P15-201ENST00000458329 171 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC005798.1-201ENST00000513715 387 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC091826.1-201ENST00000514065 313 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RNU6-714P-201ENST00000516963 103 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 BNIP3P6-201ENST00000549284 499 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.94□□□□□ -1.78
POLR2AP24928 AC007687.1-201ENST00000602704 304 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 uc_338.12-201ENST00000616344 181 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.94□□□□□ -1.78
POLR2AP24928 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
POLR2AP24928 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.94□□□□□ -1.78
POLR2AP24928 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
POLR2AP24928 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
POLR2AP24928 MTND4P1-201ENST00000457501 1466 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
POLR2AP24928 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.93□□□□□ -1.78
POLR2AP24928 MIR649-201ENST00000384843 97 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.93□□□□□ -1.78
POLR2AP24928 RNA5SP229-201ENST00000410809 99 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.93□□□□□ -1.78
POLR2AP24928 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.93□□□□□ -1.78
POLR2AP24928 AL139132.1-201ENST00000431587 344 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.93□□□□□ -1.78
POLR2AP24928 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.93□□□□□ -1.78
POLR2AP24928 AP000936.3-201ENST00000438127 255 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC105272.1-201ENST00000438604 198 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 RPS26P56-201ENST00000444468 240 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.93□□□□□ -1.78
POLR2AP24928 Y_RNA.635-201ENST00000459041 101 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 VN1R104P-201ENST00000505115 1009 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.93□□□□□ -1.78
POLR2AP24928 SNORA40.12-201ENST00000516329 111 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 NARSP2-201ENST00000518524 679 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.93□□□□□ -1.78
POLR2AP24928 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
POLR2AP24928 GTF3AP2-201ENST00000557014 266 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.93□□□□□ -1.78
POLR2AP24928 AC006006.1-201ENST00000603082 144 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 XIAPP1-201ENST00000603162 600 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.93□□□□□ -1.78
POLR2AP24928 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
POLR2AP24928 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.93□□□□□ -1.78
POLR2AP24928 Y_RNA.367-201ENST00000365544 101 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 MRPL42P3-201ENST00000401492 326 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 RNU4-47P-201ENST00000410876 114 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 RPL37P10-201ENST00000412884 288 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC074085.1-201ENST00000413598 418 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
POLR2AP24928 RPL23AP74-201ENST00000437246 471 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC006028.1-201ENST00000438379 402 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 ANP32BP2-201ENST00000454525 545 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.93□□□□□ -1.78
POLR2AP24928 AL590639.1-201ENST00000456484 337 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 MTND5P22-201ENST00000458380 195 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 RNU6-1218P-201ENST00000458990 108 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 SNORD97-201ENST00000459187 142 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AC007547.1-201ENST00000462177 490 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.93□□□□□ -1.78
POLR2AP24928 SULT1C2P2-201ENST00000562517 294 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 CTHRC1P1-201ENST00000605383 469 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AL008729.2-201ENST00000606393 473 ntBASIC3.93□□□□□ -1.78
POLR2AP24928 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms