Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RFX1P22670 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX1P22670 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX1P22670 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX1P22670 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX1P22670 RNY1P16-201ENST00000363063 111 ntBASIC5.33□□□□□ -1.56
RFX1P22670 SNORA70.2-201ENST00000364506 135 ntBASIC5.33□□□□□ -1.56
RFX1P22670 RNU6-166P-201ENST00000384371 107 ntBASIC5.33□□□□□ -1.56
RFX1P22670 MIR34A-201ENST00000385130 110 ntBASIC5.33□□□□□ -1.56
RFX1P22670 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFX1P22670 RNU2-68P-201ENST00000410878 191 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AL117339.3-201ENST00000418733 162 ntBASIC5.33□□□□□ -1.56
RFX1P22670 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.33□□□□□ -1.56
RFX1P22670 EIF4EP2-201ENST00000422816 654 ntBASIC5.33□□□□□ -1.56
RFX1P22670 RPL23AP45-201ENST00000476406 468 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC069499.1-201ENST00000489433 509 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC114801.2-201ENST00000503825 781 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC017037.1-201ENST00000508460 471 ntBASIC5.33□□□□□ -1.56
RFX1P22670 RNA5SP165-201ENST00000517142 115 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.33□□□□□ -1.56
RFX1P22670 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX1P22670 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX1P22670 MYL12BP1-201ENST00000569826 507 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX1P22670 AL021879.1-201ENST00000611756 288 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC004852.3-201ENST00000614131 326 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC019206.1-201ENST00000621938 425 ntBASIC5.33□□□□□ -1.56
RFX1P22670 MIR4272-201ENST00000635924 64 ntBASIC5.33□□□□□ -1.56
RFX1P22670 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX1P22670 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.33□□□□□ -1.56
RFX1P22670 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX1P22670 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFX1P22670 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX1P22670 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX1P22670 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX1P22670 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX1P22670 AC010266.2-201ENST00000564741 3255 ntBASIC5.33□□□□□ -1.56
RFX1P22670 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX1P22670 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX1P22670 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RFX1P22670 AC007685.1-201ENST00000329806 452 ntBASIC5.32□□□□□ -1.56
RFX1P22670 Y_RNA.152-201ENST00000363578 100 ntBASIC5.32□□□□□ -1.56
RFX1P22670 RNU6-1317P-201ENST00000364582 104 ntBASIC5.32□□□□□ -1.56
RFX1P22670 SNORD14.1-201ENST00000365609 90 ntBASIC5.32□□□□□ -1.56
RFX1P22670 RNU6-1222P-201ENST00000384615 107 ntBASIC5.32□□□□□ -1.56
RFX1P22670 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX1P22670 NUP35P1-201ENST00000422734 947 ntBASIC5.32□□□□□ -1.56
RFX1P22670 CKS1BP6-201ENST00000424932 240 ntBASIC5.32□□□□□ -1.56
RFX1P22670 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX1P22670 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX1P22670 CHEK2P4-201ENST00000450340 246 ntBASIC5.32□□□□□ -1.56
RFX1P22670 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX1P22670 snoU13.1-201ENST00000459157 104 ntBASIC5.32□□□□□ -1.56
RFX1P22670 FO393415.2-201ENST00000480085 343 ntBASIC5.32□□□□□ -1.56
RFX1P22670 RN7SL319P-201ENST00000480656 221 ntBASIC5.32□□□□□ -1.56
RFX1P22670 AC023424.1-201ENST00000496058 459 ntBASIC5.32□□□□□ -1.56
RFX1P22670 AC093852.1-201ENST00000503587 266 ntBASIC5.32□□□□□ -1.56
RFX1P22670 NDUFB4P9-201ENST00000511646 388 ntBASIC5.32□□□□□ -1.56
RFX1P22670 RNU7-4P-201ENST00000516961 62 ntBASIC5.32□□□□□ -1.56
RFX1P22670 SNORA31.19-201ENST00000517079 126 ntBASIC5.32□□□□□ -1.56
RFX1P22670 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.32□□□□□ -1.56
RFX1P22670 CYCSP40-201ENST00000575927 294 ntBASIC5.32□□□□□ -1.56
RFX1P22670 MIR5696-201ENST00000578474 85 ntBASIC5.32□□□□□ -1.56
RFX1P22670 MIR3936-201ENST00000584304 110 ntBASIC5.32□□□□□ -1.56
RFX1P22670 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX1P22670 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX1P22670 MIR8076-201ENST00000611401 83 ntBASIC5.32□□□□□ -1.56
RFX1P22670 AL591926.8-201ENST00000616876 211 ntBASIC5.32□□□□□ -1.56
RFX1P22670 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX1P22670 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RFX1P22670 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFX1P22670 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX1P22670 USP8P1-201ENST00000494673 3183 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFX1P22670 RN7SKP227-201ENST00000364445 330 ntBASIC5.31□□□□□ -1.56
RFX1P22670 MIR10A-201ENST00000385043 110 ntBASIC5.31□□□□□ -1.56
RFX1P22670 MIR298-201ENST00000401212 88 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AP000580.1-201ENST00000404439 358 ntBASIC5.31□□□□□ -1.56
RFX1P22670 PGBD4P6-201ENST00000421501 610 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX1P22670 RPL34P20-201ENST00000442771 351 ntBASIC5.31□□□□□ -1.56
RFX1P22670 ANP32BP2-201ENST00000454525 545 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC092798.1-201ENST00000458542 409 ntBASIC5.31□□□□□ -1.56
RFX1P22670 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
RFX1P22670 RNU6-1271P-201ENST00000517049 105 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX1P22670 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.31□□□□□ -1.56
RFX1P22670 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX1P22670 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX1P22670 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.31□□□□□ -1.56
RFX1P22670 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX1P22670 AC008121.1-201ENST00000603244 268 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC009314.1-201ENST00000603871 304 ntBASIC5.31□□□□□ -1.56
RFX1P22670 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX1P22670 AC083809.1-201ENST00000615051 472 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC099506.2-201ENST00000623074 221 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC138627.2-201ENST00000624202 601 ntBASIC5.31□□□□□ -1.56
RFX1P22670 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX1P22670 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RFX1P22670 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms