Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VIMP08670 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.91□□□□□ -1.94
VIMP08670 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VIMP08670 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 RNU1-105P-201ENST00000363470 161 ntBASIC2.91□□□□□ -1.94
VIMP08670 RNA5SP515-201ENST00000364570 118 ntBASIC2.91□□□□□ -1.94
VIMP08670 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
VIMP08670 SEPT2P1-201ENST00000419651 180 ntBASIC2.91□□□□□ -1.94
VIMP08670 CYCSP46-201ENST00000423569 204 ntBASIC2.91□□□□□ -1.94
VIMP08670 RPL7P37-201ENST00000425095 738 ntBASIC2.91□□□□□ -1.94
VIMP08670 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 GTF2IP20-201ENST00000431663 360 ntBASIC2.91□□□□□ -1.94
VIMP08670 GPM6BP2-201ENST00000432046 144 ntBASIC2.91□□□□□ -1.94
VIMP08670 CETN4P-201ENST00000432407 469 ntBASIC2.91□□□□□ -1.94
VIMP08670 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 RPS24P13-201ENST00000442520 397 ntBASIC2.91□□□□□ -1.94
VIMP08670 TAF9P1-201ENST00000445421 515 ntBASIC2.91□□□□□ -1.94
VIMP08670 GPM6BP1-201ENST00000446387 144 ntBASIC2.91□□□□□ -1.94
VIMP08670 TAF9P2-201ENST00000454958 515 ntBASIC2.91□□□□□ -1.94
VIMP08670 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.91□□□□□ -1.94
VIMP08670 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.91□□□□□ -1.94
VIMP08670 AC109925.1-201ENST00000478069 331 ntBASIC2.91□□□□□ -1.94
VIMP08670 RN7SL432P-201ENST00000484057 298 ntBASIC2.91□□□□□ -1.94
VIMP08670 RPL36AP51-201ENST00000487216 318 ntBASIC2.91□□□□□ -1.94
VIMP08670 AC010587.1-201ENST00000505809 469 ntBASIC2.91□□□□□ -1.94
VIMP08670 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.91□□□□□ -1.94
VIMP08670 RNA5SP337-201ENST00000517007 109 ntBASIC2.91□□□□□ -1.94
VIMP08670 RNA5SP165-201ENST00000517142 115 ntBASIC2.91□□□□□ -1.94
VIMP08670 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.91□□□□□ -1.94
VIMP08670 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.91□□□□□ -1.94
VIMP08670 MRPS36P5-201ENST00000551909 298 ntBASIC2.91□□□□□ -1.94
VIMP08670 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.91□□□□□ -1.94
VIMP08670 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 AL358072.1-201ENST00000604156 575 ntBASIC2.91□□□□□ -1.94
VIMP08670 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 AL589994.2-201ENST00000621124 579 ntBASIC2.91□□□□□ -1.94
VIMP08670 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.91□□□□□ -1.94
VIMP08670 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VIMP08670 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.9□□□□□ -1.94
VIMP08670 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VIMP08670 RNU4-21P-201ENST00000362802 126 ntBASIC2.9□□□□□ -1.95
VIMP08670 RNU4-1-201ENST00000363925 141 ntBASIC2.9□□□□□ -1.95
VIMP08670 RNU5E-6P-201ENST00000365574 115 ntBASIC2.9□□□□□ -1.95
VIMP08670 SMIM11P1-201ENST00000369586 178 ntBASIC2.9□□□□□ -1.95
VIMP08670 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
VIMP08670 SNORA26.8-201ENST00000391306 124 ntBASIC2.9□□□□□ -1.95
VIMP08670 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VIMP08670 MRPL42P2-201ENST00000403169 426 ntBASIC2.9□□□□□ -1.95
VIMP08670 Y_RNA.598-201ENST00000410480 95 ntBASIC2.9□□□□□ -1.95
VIMP08670 RNU4-47P-201ENST00000410876 114 ntBASIC2.9□□□□□ -1.95
VIMP08670 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.9□□□□□ -1.95
VIMP08670 SYF2P2-201ENST00000417620 583 ntBASIC2.9□□□□□ -1.95
VIMP08670 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.9□□□□□ -1.95
VIMP08670 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.9□□□□□ -1.95
VIMP08670 AL589872.1-201ENST00000426602 288 ntBASIC2.9□□□□□ -1.95
VIMP08670 HMGN2P31-201ENST00000432430 273 ntBASIC2.9□□□□□ -1.95
VIMP08670 PRDX3P3-201ENST00000447765 522 ntBASIC2.9□□□□□ -1.95
VIMP08670 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.9□□□□□ -1.95
VIMP08670 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.9□□□□□ -1.95
VIMP08670 AP000852.1-201ENST00000472460 573 ntBASIC2.9□□□□□ -1.95
VIMP08670 RNU2-10P-201ENST00000516375 211 ntBASIC2.9□□□□□ -1.95
VIMP08670 RN7SKP272-201ENST00000516988 232 ntBASIC2.9□□□□□ -1.95
VIMP08670 AC023632.4-201ENST00000517783 191 ntBASIC2.9□□□□□ -1.95
VIMP08670 AP003467.2-201ENST00000520175 319 ntBASIC2.9□□□□□ -1.95
VIMP08670 AC060788.1-201ENST00000521318 469 ntBASIC2.9□□□□□ -1.95
VIMP08670 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.9□□□□□ -1.95
VIMP08670 RPL21P5-201ENST00000554662 472 ntBASIC2.9□□□□□ -1.95
VIMP08670 MIR4446-201ENST00000578505 67 ntBASIC2.9□□□□□ -1.95
VIMP08670 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.9□□□□□ -1.95
VIMP08670 CKS1BP3-201ENST00000600888 237 ntBASIC2.9□□□□□ -1.95
VIMP08670 AC107294.1-201ENST00000609524 467 ntBASIC2.9□□□□□ -1.95
VIMP08670 AC008498.1-201ENST00000613012 531 ntBASIC2.9□□□□□ -1.95
VIMP08670 AL162274.2-201ENST00000614406 332 ntBASIC2.9□□□□□ -1.95
VIMP08670 FRG1KP-201ENST00000623592 341 ntBASIC2.9□□□□□ -1.95
VIMP08670 AC097520.1-201ENST00000624435 385 ntBASIC2.9□□□□□ -1.95
VIMP08670 MIR622-201ENST00000638396 96 ntBASIC2.9□□□□□ -1.95
VIMP08670 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VIMP08670 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VIMP08670 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
VIMP08670 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
VIMP08670 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VIMP08670 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VIMP08670 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VIMP08670 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
VIMP08670 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VIMP08670 AC026241.1-201ENST00000517873 2142 ntBASIC2.89□□□□□ -1.95
VIMP08670 RNU6-288P-201ENST00000363690 104 ntBASIC2.89□□□□□ -1.95
VIMP08670 MIR592-201ENST00000384959 97 ntBASIC2.89□□□□□ -1.95
VIMP08670 AL021407.1-201ENST00000404531 386 ntBASIC2.89□□□□□ -1.95
VIMP08670 SNORA11B-201ENST00000408175 129 ntBASIC2.89□□□□□ -1.95
VIMP08670 RNU2-68P-201ENST00000410878 191 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.89□□□□□ -1.95
VIMP08670 NPM1P11-201ENST00000417106 855 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC007283.2-201ENST00000424739 197 ntBASIC2.89□□□□□ -1.95
VIMP08670 ISCA1P1-201ENST00000426679 387 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.89□□□□□ -1.95
VIMP08670 AL451062.2-201ENST00000427515 271 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC119618.1-201ENST00000434191 222 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms