Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.59□□□□□ -2.15
COL1A1P02452 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL1A1P02452 AC118942.1-201ENST00000529674 1035 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 AC009268.1-201ENST00000561352 1203 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.59□□□□□ -2.15
COL1A1P02452 AC090897.2-201ENST00000581715 130 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL1A1P02452 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.59□□□□□ -2.15
COL1A1P02452 AL109659.3-201ENST00000624985 950 ntBASIC1.59□□□□□ -2.15
COL1A1P02452 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.59□□□□□ -2.16
COL1A1P02452 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.58□□□□□ -2.16
COL1A1P02452 RNU6-730P-201ENST00000383954 104 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 RPL7P27-201ENST00000403775 720 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.58□□□□□ -2.16
COL1A1P02452 AL121578.1-201ENST00000428051 892 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.58□□□□□ -2.16
COL1A1P02452 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.58□□□□□ -2.16
COL1A1P02452 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL1A1P02452 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.58□□□□□ -2.16
COL1A1P02452 AC090888.1-201ENST00000561335 1141 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.58□□□□□ -2.16
COL1A1P02452 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.58□□□□□ -2.16
COL1A1P02452 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.58□□□□□ -2.16
COL1A1P02452 AC055876.5-201ENST00000605667 259 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 AC025594.3-201ENST00000613068 790 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 AP006248.3-201ENST00000623580 594 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.58□□□□□ -2.16
COL1A1P02452 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.58□□□□□ -2.16
COL1A1P02452 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.58□□□□□ -2.16
COL1A1P02452 MIR6767-201ENST00000637302 66 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 MIR7515-201ENST00000637837 67 ntBASIC1.58□□□□□ -2.16
COL1A1P02452 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL1A1P02452 Y_RNA.393-201ENST00000383936 102 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 RNU6-920P-201ENST00000410926 92 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 RNU2-32P-201ENST00000411193 191 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.57□□□□□ -2.16
COL1A1P02452 SEPT2P1-201ENST00000419651 180 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.57□□□□□ -2.16
COL1A1P02452 RPS3AP44-201ENST00000425466 790 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.57□□□□□ -2.16
COL1A1P02452 AL714022.1-201ENST00000439897 151 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL1A1P02452 HMGN2P18-201ENST00000450680 270 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 ANKRD26P4-201ENST00000455755 950 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 RPS20P24-201ENST00000457473 361 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 MTND4LP3-201ENST00000468320 276 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC116337.2-201ENST00000477662 156 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC104108.1-201ENST00000509930 412 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 RNU6-889P-201ENST00000517189 103 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC008676.3-201ENST00000521237 435 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.57□□□□□ -2.16
COL1A1P02452 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.57□□□□□ -2.16
COL1A1P02452 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.57□□□□□ -2.16
COL1A1P02452 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.57□□□□□ -2.16
COL1A1P02452 AC012254.4-201ENST00000588843 273 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC012669.1-201ENST00000603209 283 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 BNIP3P4-201ENST00000604946 565 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC080078.3-201ENST00000605407 463 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC004775.1-201ENST00000607389 753 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 AC008121.3-201ENST00000618726 433 ntBASIC1.57□□□□□ -2.16
COL1A1P02452 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL1A1P02452 MIR548J-201ENST00000408833 112 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 LINC01347-201ENST00000417964 355 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 TRIM60P13-201ENST00000432350 1283 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 MTND4LP10-201ENST00000435146 291 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 RAD1P2-201ENST00000446414 663 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 PSPHP1-201ENST00000450062 261 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 HMGN3P1-201ENST00000453847 193 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 RNU6-420P-201ENST00000458780 107 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 RNU7-23P-201ENST00000459465 62 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.56□□□□□ -2.16
COL1A1P02452 AC093770.1-201ENST00000511559 571 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 MRPS36P2-201ENST00000512569 299 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.56□□□□□ -2.16
COL1A1P02452 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.56□□□□□ -2.16
COL1A1P02452 FAM106DP-201ENST00000586416 501 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AL137246.1-201ENST00000607072 977 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AC107214.2-201ENST00000608204 634 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
COL1A1P02452 AC130650.2-201ENST00000618736 2403 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 RPS12P24-201ENST00000412619 387 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.56□□□□□ -2.16
COL1A1P02452 CALM1P1-201ENST00000442082 433 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 MTCYBP3-201ENST00000445588 1137 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.56□□□□□ -2.16
COL1A1P02452 RPS3AP22-201ENST00000488297 769 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 MTCO3P42-201ENST00000509488 518 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.56□□□□□ -2.16
COL1A1P02452 MTCO3P39-201ENST00000514812 518 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 RNU2-44P-201ENST00000516795 194 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.56□□□□□ -2.16
COL1A1P02452 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.56□□□□□ -2.16
COL1A1P02452 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.56□□□□□ -2.16
COL1A1P02452 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.56□□□□□ -2.16
COL1A1P02452 CBX3P2-202ENST00000583365 535 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AC018618.2-201ENST00000604770 446 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms