Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DDX39BP1-205ENST00000422507 192 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AL158156.1-201ENST00000422509 473 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 RPL21P66-201ENST00000426566 466 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 PPIAP13-201ENST00000434706 478 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 RPL39P29-201ENST00000447779 157 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA3O60609 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA3O60609 AC006445.2-201ENST00000510061 472 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 IGLV3-24-201ENST00000517477 197 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AC026421.1-201ENST00000519101 163 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA3O60609 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA3O60609 HMGB1P14-201ENST00000557424 591 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 AC007224.1-201ENST00000564410 144 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 RN7SL802P-201ENST00000577858 299 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 MIR5695-201ENST00000579717 85 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA3O60609 AL139395.1-201ENST00000603662 160 ntBASIC5.29□□□□□ -1.56
GFRA3O60609 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA3O60609 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
GFRA3O60609 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
GFRA3O60609 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA3O60609 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA3O60609 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 AC011933.2-201ENST00000578539 2790 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 AC245100.2-201ENST00000454544 1679 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
GFRA3O60609 Y_RNA.120-201ENST00000363304 110 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 RNU6-787P-201ENST00000384032 107 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 AC007568.1-201ENST00000422912 471 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.28□□□□□ -1.56
GFRA3O60609 MRPS21P2-201ENST00000424704 264 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 RN7SL585P-201ENST00000470538 280 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.28□□□□□ -1.56
GFRA3O60609 ATP5EP1-201ENST00000510257 156 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 RNU6-27P-201ENST00000516146 107 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 RN7SKP288-201ENST00000516227 268 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 RNU6-109P-201ENST00000516364 107 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 RNU6-184P-201ENST00000516514 107 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 RN7SKP260-201ENST00000516907 149 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 MIR4715-201ENST00000584117 79 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 AC005255.1-201ENST00000593748 216 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 SNORD91B-202ENST00000608459 222 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 AL161629.2-201ENST00000615347 275 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.28□□□□□ -1.56
GFRA3O60609 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA3O60609 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA3O60609 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA3O60609 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.56
GFRA3O60609 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.27□□□□□ -1.57
GFRA3O60609 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GFRA3O60609 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.27□□□□□ -1.57
GFRA3O60609 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.27□□□□□ -1.57
GFRA3O60609 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 RNU6-1048P-201ENST00000364054 107 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 RNU6-647P-201ENST00000364243 107 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 RNU6-597P-201ENST00000365620 102 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 SNORD51-201ENST00000384320 80 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 MIR105-1-201ENST00000385222 81 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 SNORA26.5-201ENST00000391215 123 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 AL009179.1-201ENST00000406085 265 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 RN7SKP151-201ENST00000410230 316 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 Y_RNA.593-201ENST00000410292 98 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 AC099677.1-201ENST00000420575 175 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.27□□□□□ -1.57
GFRA3O60609 RPL7AP61-201ENST00000443410 636 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 AC020593.1-201ENST00000507399 299 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 MRPS33P2-201ENST00000507850 322 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms