Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 FAM133CP-201ENST00000332869 704 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 RNU6-560P-201ENST00000364007 108 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL591416.1-201ENST00000404015 867 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL355497.1-201ENST00000406262 551 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC003685.2-201ENST00000422795 395 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC010153.1-201ENST00000432862 727 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 ZNF886P-201ENST00000450781 723 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC004924.1-201ENST00000480160 781 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC109486.1-201ENST00000486833 374 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 RPS15AP36-201ENST00000492022 382 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC016550.1-201ENST00000505348 785 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 SUMO2P5-201ENST00000506790 245 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC096725.1-201ENST00000514266 313 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 MTCO2P15-201ENST00000532655 656 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 SNORD53-201ENST00000579969 78 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 UBE2L4-201ENST00000587688 464 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 VN1R90P-201ENST00000595717 726 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL121652.1-201ENST00000608851 448 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC009090.3-201ENST00000616553 565 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AL158801.5-201ENST00000623123 465 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC092608.2-201ENST00000624427 218 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC079416.3-201ENST00000624479 549 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.81□□□□□ -2.12
RBFOX3A6NFN3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RNU6-859P-201ENST00000362728 107 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP125-201ENST00000364843 120 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RNU6-298P-201ENST00000390888 96 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 MIR1284-201ENST00000408337 120 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 U6atac.2-201ENST00000408644 118 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 U3.40-201ENST00000408706 208 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP184-201ENST00000411071 108 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC063976.3-201ENST00000426849 329 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RPL30P4-201ENST00000429309 333 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 ARL5AP4-201ENST00000430731 512 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 NANOGP2-201ENST00000435391 727 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 TPT1P14-201ENST00000448018 505 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 HMGN2P10-201ENST00000448085 265 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 CECR9-201ENST00000453421 199 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 USP9YP10-201ENST00000454868 628 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 SNORD109B-201ENST00000458961 67 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 SNORD109A-201ENST00000459128 67 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 MEMO1P3-201ENST00000459811 302 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC128713.1-201ENST00000471495 306 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP356-201ENST00000515972 94 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 MIR892C-201ENST00000516410 77 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 MRPS36P5-201ENST00000551909 298 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RPP40P2-201ENST00000603596 712 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AL355598.1-201ENST00000604169 202 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AL450336.1-201ENST00000605180 586 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 RPL21P136-201ENST00000605378 396 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 uc_338.14-201ENST00000613162 166 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC107075.1-201ENST00000613695 314 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AP003485.2-201ENST00000623636 610 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AP003400.5-201ENST00000624827 617 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 AC025048.6-202ENST00000627667 438 ntBASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RBFOX3A6NFN3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 RNU6-1167P-201ENST00000363227 94 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 MIR218-1-201ENST00000384999 110 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 MIR27B-201ENST00000385129 97 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 SNORD23.1-201ENST00000408212 104 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms