Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 BNIP3P30-201ENST00000601184 574 ntBASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 AC013553.2-201ENST00000604244 589 ntBASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 AC002553.4-201ENST00000616896 331 ntBASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 AC091953.5-201ENST00000622919 233 ntBASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TBC1D3FA6NER0 CKAP2P1-201ENST00000555477 2049 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC008568.2-201ENST00000623862 2313 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 CEP170P1-201ENST00000502249 4587 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 RNU4-35P-201ENST00000362588 141 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 Y_RNA.255-201ENST00000364581 97 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 Y_RNA.295-201ENST00000364918 102 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 SNORD6-201ENST00000365444 73 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 RNU6-1029P-201ENST00000384109 107 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 MIR483-201ENST00000385070 76 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 MIR493-201ENST00000385254 89 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 MTCYBP8-201ENST00000422855 651 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL356867.1-201ENST00000429623 299 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 ATP5JP1-201ENST00000431631 322 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 HMGB1P12-201ENST00000438594 598 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 NFU1P2-201ENST00000448700 469 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC073415.1-201ENST00000449240 153 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL118520.1-201ENST00000450770 291 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 RBMY2UP-201ENST00000453474 324 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 RNU7-170P-201ENST00000459303 61 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 RPS29P25-201ENST00000481709 171 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL163973.1-201ENST00000484753 577 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC069439.1-201ENST00000494739 167 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 RBBP4P6-201ENST00000508098 202 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 PCBP2P3-201ENST00000509726 843 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 TTC39CP1-201ENST00000512513 755 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC234778.2-201ENST00000566241 354 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC174048.1-201ENST00000603389 144 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 YWHAEP7-203ENST00000622054 312 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC048347.1-201ENST00000624621 427 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC244205.2-202ENST00000635781 342 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 MTND5P42-201ENST00000637720 498 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL732372.2-225ENST00000642124 456 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AL133383.2-201ENST00000622958 2336 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 AC004972.1-201ENST00000623934 2209 ntBASIC3.54□□□□□ -1.84
TBC1D3FA6NER0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 RPL7P26-201ENST00000333817 754 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 RNU6-525P-201ENST00000363685 104 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 RNU6-288P-201ENST00000363690 104 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 SNORA9-201ENST00000384215 133 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 Y_RNA.573-201ENST00000384763 105 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 RNU6-817P-201ENST00000391083 104 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 USP9YP6-201ENST00000413550 854 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 AL109913.1-201ENST00000421173 514 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 SEPT14P3-201ENST00000439401 183 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 CBWD4P-201ENST00000445695 655 ntBASIC3.53□□□□□ -1.84
TBC1D3FA6NER0 AL732372.2-207ENST00000445840 183 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms