Protein–RNA interactions for Protein: A0A0C4DH35

IGHV3-35, Immunoglobulin heavy variable 3-35 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35A0A0C4DH35 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC090572.1-201ENST00000519251 160 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 MIR3609-201ENST00000582661 80 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC004223.2-201ENST00000590309 544 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC012468.1-201ENST00000604888 430 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 NDUFA8P1-201ENST00000605525 367 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 Z99129.1-201ENST00000612510 255 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC139792.2-201ENST00000624218 587 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC068880.5-201ENST00000624331 290 ntBASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.39□□□□□ -2.03
IGHV3-35A0A0C4DH35 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 MTND5P1-201ENST00000445440 1375 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-1167P-201ENST00000363227 94 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 U3.6-201ENST00000363622 211 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 SNORA38.1-201ENST00000364172 131 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-641P-201ENST00000384006 107 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU5A-6P-201ENST00000384136 116 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC009237.5-201ENST00000414271 501 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC104651.1-201ENST00000427559 735 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AL589823.1-201ENST00000429577 183 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 GPR143P-201ENST00000434155 205 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 C1DP4-201ENST00000455429 424 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RPL7P5-201ENST00000471472 736 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RPS3AP17-201ENST00000472594 777 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC007182.2-201ENST00000489251 402 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AL358832.1-201ENST00000497800 389 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC105252.1-201ENST00000503089 286 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC091435.1-201ENST00000505442 584 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-1282P-201ENST00000516735 96 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RN7SKP272-201ENST00000516988 232 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-410P-201ENST00000517006 107 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNA5SP290-201ENST00000517133 127 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 HMGB1P14-201ENST00000557424 591 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AL845331.3-202ENST00000562856 261 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC009063.1-201ENST00000563342 702 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC034102.8-201ENST00000615146 484 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC007998.5-201ENST00000622938 237 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
IGHV3-35A0A0C4DH35 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 Y_RNA.22-201ENST00000362492 102 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 Y_RNA.245-201ENST00000364493 95 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-282P-201ENST00000365357 103 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-946P-201ENST00000383878 107 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-14P-201ENST00000384630 106 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-817P-201ENST00000391083 104 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 EI24P2-201ENST00000397776 1076 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 AL139397.2-201ENST00000404529 772 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNA5SP293-201ENST00000410527 113 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU2-39P-201ENST00000410604 198 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU2-66P-201ENST00000410650 161 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 MTCO3P41-201ENST00000414801 328 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC092047.1-201ENST00000424997 240 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 AL451062.2-201ENST00000427515 271 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 MTND4P25-201ENST00000441039 533 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 AC079781.2-201ENST00000446424 169 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 MTCYBP1-201ENST00000454315 1119 ntBASIC2.37□□□□□ -2.03
IGHV3-35A0A0C4DH35 RNU6-953P-201ENST00000459154 107 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms