Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC025755.1-201ENST00000521306 278 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AP003049.1-201ENST00000529418 457 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC023825.1-201ENST00000566704 1030 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 MTND4LP5-201ENST00000605152 292 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AL158211.4-201ENST00000606988 584 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC005332.6-201ENST00000613178 446 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 SDR42E1P2-201ENST00000614861 481 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 SDR42E1P4-201ENST00000620894 481 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC244517.12-201ENST00000623581 663 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC107982.1-201ENST00000507171 1300 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 MTND5P29-201ENST00000458676 1807 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 AC004520.1-201ENST00000608362 1413 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 MTND4P1-201ENST00000457501 1466 ntBASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV41A0A0B4J266 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 MIR888-201ENST00000401186 77 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 CIR1P3-201ENST00000405137 479 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 GSTA9P-201ENST00000406231 611 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 RNU2-49P-201ENST00000410666 184 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 BX119904.4-201ENST00000424402 301 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 ZNF863P-201ENST00000426746 417 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC008850.1-201ENST00000427546 362 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC017099.1-201ENST00000448261 1028 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 RNU6-717P-201ENST00000459076 104 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC080013.2-201ENST00000460866 323 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC055731.1-201ENST00000474387 401 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC098591.2-201ENST00000510152 315 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 MTCO3P27-201ENST00000514397 196 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 SCARNA3-201ENST00000517097 143 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 HIGD1AP17-201ENST00000554576 276 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 YWHAZP1-201ENST00000556286 722 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 MIR3199-1-201ENST00000582434 88 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC078899.2-201ENST00000595282 212 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC069304.2-201ENST00000605154 435 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 AC243773.3-201ENST00000613270 256 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 MIR4275-201ENST00000636486 87 ntBASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV41A0A0B4J266 CENPCP1-201ENST00000533085 2578 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AP005901.5-201ENST00000545779 1796 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 ZNF355P-201ENST00000427301 3216 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 RNU6-28P-201ENST00000362378 107 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 SNORD114-1-201ENST00000362705 72 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 RNA5SP270-201ENST00000411361 118 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC068533.2-201ENST00000411872 306 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 USP9YP19-201ENST00000412165 485 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 TPMTP2-201ENST00000414372 726 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 EIF1AXP1-201ENST00000419267 435 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL109913.1-201ENST00000421173 514 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC003685.2-201ENST00000422795 395 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC007919.1-201ENST00000429380 217 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 GTF2IP7-202ENST00000436677 309 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 HMGB3P12-201ENST00000438745 556 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 RPL12P25-201ENST00000455592 494 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 RNA5SP291-201ENST00000517222 105 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 SNORA31.25-201ENST00000517242 134 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 NRON-201ENST00000517270 370 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AP003355.1-201ENST00000518956 587 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC087897.1-201ENST00000550134 156 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC090615.1-201ENST00000577519 154 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 MIR5089-201ENST00000580047 84 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC008749.1-201ENST00000597650 306 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL096840.1-201ENST00000603287 93 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC099785.1-201ENST00000605697 437 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL021997.1-201ENST00000605757 193 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AL589743.7-201ENST00000612637 233 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC098657.3-201ENST00000620434 263 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms