Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AL136380.1-201ENST00000447970 162 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC125238.1-201ENST00000448842 249 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RN7SL863P-201ENST00000462370 296 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 MTCO2P29-201ENST00000465212 189 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RPL7P5-201ENST00000471472 736 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RPL7P23-201ENST00000493874 747 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC009646.1-201ENST00000510455 318 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNU6-718P-201ENST00000516166 105 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC090572.1-201ENST00000519251 160 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AP001893.2-201ENST00000526949 202 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AK6P1-201ENST00000540219 478 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 MIR5004-201ENST00000579078 107 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 COX6CP3-201ENST00000580869 223 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 MIR98-201ENST00000606724 119 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC007038.2-201ENST00000608095 740 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC107294.3-201ENST00000609211 526 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AL355810.1-201ENST00000614629 552 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 LRRC77P-213ENST00000637727 880 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RNY3P13-201ENST00000365542 102 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RNU6-754P-201ENST00000391166 107 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 CIR1P3-201ENST00000405137 479 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL353193.1-201ENST00000421444 268 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 BEND7P1-201ENST00000422058 457 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 MRPS10P2-201ENST00000431226 381 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RPL23AP83-201ENST00000434984 473 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RPL23AP22-201ENST00000437556 453 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 HMGN1P18-201ENST00000457642 277 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AC126177.3-201ENST00000551839 688 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL133153.1-201ENST00000557756 303 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AC012493.2-201ENST00000595083 291 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL031176.1-201ENST00000604554 466 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL136363.1-201ENST00000605349 337 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL158211.4-201ENST00000606988 584 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL161734.1-201ENST00000609720 557 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 uc_338.25-201ENST00000613756 156 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 MIR8057-201ENST00000620957 69 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 AL353748.2-201ENST00000622148 471 ntBASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNX9Q9Y5X1 ELF2P3-201ENST00000445099 1506 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 OR1S2-201ENST00000302592 978 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 Y_RNA.1-201ENST00000352915 104 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 RNA5SP374-201ENST00000362939 125 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 SNORA20.2-201ENST00000383922 131 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 RNA5SP31-201ENST00000411144 127 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 RPS15AP12-201ENST00000419498 388 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 TIMM9P3-201ENST00000428659 274 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC073464.1-201ENST00000429823 534 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 RPL23AP69-201ENST00000431134 458 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 SNRPEP4-201ENST00000435815 279 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC115115.1-201ENST00000449927 248 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 HMGN2P13-201ENST00000476476 274 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC135721.1-201ENST00000497954 479 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 RNU6-798P-201ENST00000516912 103 ntBASIC3.41□□□□□ -1.86
SNX9Q9Y5X1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms