Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGC3Q9UN70 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGC3Q9UN70 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 Y_RNA.286-201ENST00000364813 102 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 SNORD12B-201ENST00000410433 91 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AC140479.3-201ENST00000418944 1126 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AC009238.2-201ENST00000431026 355 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AC005532.2-201ENST00000467154 373 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AL365265.1-201ENST00000621045 234 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 MAPK10-328ENST00000641553 4009 ntBASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHGC3Q9UN70 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 MIR410-201ENST00000362222 80 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL391361.1-201ENST00000405580 489 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 RNU4-30P-201ENST00000410245 143 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 OR2AH1P-201ENST00000425717 928 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 RPL12P18-201ENST00000437175 325 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL031659.1-201ENST00000447075 539 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 ANP32BP2-201ENST00000454525 545 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AC092798.1-201ENST00000458542 409 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AC117440.1-201ENST00000474107 571 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 RPL31P13-201ENST00000484151 370 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 RNA5SP291-201ENST00000517222 105 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 RNU4-60P-201ENST00000517239 135 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 AL353743.1-202ENST00000431724 1695 ntBASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHGC3Q9UN70 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 RNU6-78P-201ENST00000362897 107 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 RNU6-1286P-201ENST00000383871 107 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 Y_RNA.441-201ENST00000384123 112 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 UBA52P6-201ENST00000399822 382 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 MIR1182-201ENST00000408363 97 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 U3.39-201ENST00000408569 239 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 RNU6-1135P-201ENST00000411083 103 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 Z85995.1-201ENST00000415547 335 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC079355.1-201ENST00000421770 223 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 RPS29P10-201ENST00000439197 166 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AL589765.3-201ENST00000446084 462 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 COPS8P2-201ENST00000473228 627 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 OR2AO1P-201ENST00000476497 403 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC091959.1-201ENST00000495857 238 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 RN7SKP49-201ENST00000516675 260 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 RNU6-572P-201ENST00000516724 80 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC007390.2-201ENST00000606229 3803 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC099506.2-201ENST00000623074 221 ntBASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHGC3Q9UN70 AL139811.1-201ENST00000424779 2299 ntBASIC5.51□□□□□ -1.53
PCDHGC3Q9UN70 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms