Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC011487.3-201ENST00000593607 453 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RLIMP1-201ENST00000339626 1680 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC118273.1-201ENST00000525324 3006 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC104260.2-201ENST00000623551 3497 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 RNU6-78P-201ENST00000362897 107 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 SNORD81.1-201ENST00000363064 77 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.405-201ENST00000383979 100 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.451-201ENST00000384200 100 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.524-201ENST00000384564 100 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.561-201ENST00000384694 100 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 MIR600-201ENST00000385007 98 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 BTF3L4P2-201ENST00000392798 346 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 RNU4-61P-201ENST00000411243 107 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AP000275.1-201ENST00000411943 390 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 RPL17P36-201ENST00000420302 549 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 SNRPEP9-201ENST00000436794 238 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC006026.2-201ENST00000457376 180 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC009127.1-201ENST00000467090 155 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC006427.1-201ENST00000514359 712 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC093023.1-201ENST00000547375 507 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 AC136601.2-201ENST00000604356 474 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 MIR6820-201ENST00000611508 62 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
FOXD3Q9UJU5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 NOL8P1-201ENST00000508336 3529 ntBASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXD3Q9UJU5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 U3.3-201ENST00000362986 216 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 Y_RNA.123-201ENST00000363338 102 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 Y_RNA.358-201ENST00000365491 99 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 SNORD115-46-201ENST00000390982 71 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 HMGN2P21-201ENST00000447764 270 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 HMGB3P17-201ENST00000504195 649 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 ANXA2P1-201ENST00000505539 926 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 RNU6-182P-201ENST00000516970 105 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 SNORA31.18-201ENST00000517043 134 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 MIR3934-201ENST00000579806 107 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 MIR4436B2-201ENST00000581415 91 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 MIR4436B1-201ENST00000583272 91 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC009779.6-201ENST00000603972 165 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 AC091905.4-201ENST00000623432 202 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 U6.92-201ENST00000636464 89 ntBASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXD3Q9UJU5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 LINC02555-201ENST00000563933 1951 ntBASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXD3Q9UJU5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms