Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC109809.1-201ENST00000619665 545 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AC011477.1-204ENST00000623416 1325 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.3□□□□□ -2.04
CTSFQ9UBX1 AP000776.1-201ENST00000530032 1663 ntBASIC2.3□□□□□ -2.04
CTSFQ9UBX1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 OR4G2P-202ENST00000641004 1759 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 RNU4-92P-201ENST00000363783 136 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 RNU6-906P-201ENST00000384700 70 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AL162578.1-201ENST00000406202 378 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 RNU4-72P-201ENST00000410754 173 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AF274854.1-201ENST00000413236 615 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 ELOCP9-201ENST00000418624 239 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 MTCO2P17-201ENST00000424336 677 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 PIGFP3-201ENST00000441918 722 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC109445.1-201ENST00000512356 383 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC007115.1-201ENST00000546853 234 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 PRELID2P1-201ENST00000552837 301 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AL132857.1-201ENST00000555180 708 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AL353997.4-201ENST00000586196 166 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AL590808.1-201ENST00000618696 141 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 MIR6130-201ENST00000619419 109 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 MIR4275-201ENST00000636486 87 ntBASIC2.29□□□□□ -2.04
CTSFQ9UBX1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CTSFQ9UBX1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 ELF2P3-201ENST00000445099 1506 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 MTND4P27-201ENST00000450813 1354 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 RNU6-744P-201ENST00000365557 107 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 RNU1-39P-201ENST00000383897 165 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 RNU6-1316P-201ENST00000384242 108 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 RSL24D1P4-201ENST00000400938 484 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC092047.1-201ENST00000424997 240 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 SDR42E1P3-201ENST00000438345 502 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 Z82210.1-201ENST00000440037 231 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AP1S2P1-201ENST00000457344 379 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 snoU13.8-201ENST00000458890 104 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 LARP1BP2-201ENST00000486594 519 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 RPL36AP51-201ENST00000487216 318 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC010587.2-201ENST00000511727 448 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC022447.1-201ENST00000515358 464 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC021269.2-201ENST00000532318 330 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AL391261.3-201ENST00000557194 520 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AL049838.1-201ENST00000563647 981 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 UBE2L4-201ENST00000587688 464 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 MTCO2P2-201ENST00000591258 225 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC007938.3-201ENST00000604965 623 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC103810.6-201ENST00000606708 136 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC008498.1-201ENST00000613012 531 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AL158801.5-201ENST00000623123 465 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AL078595.3-201ENST00000623815 1166 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC069528.2-201ENST00000624849 1991 ntBASIC2.28□□□□□ -2.04
CTSFQ9UBX1 AC106754.1-201ENST00000562632 1513 ntBASIC2.27□□□□□ -2.05
CTSFQ9UBX1 DDX10P1-201ENST00000448545 1933 ntBASIC2.27□□□□□ -2.05
CTSFQ9UBX1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.27□□□□□ -2.05
CTSFQ9UBX1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CTSFQ9UBX1 AC006020.1-201ENST00000420179 1854 ntBASIC2.27□□□□□ -2.05
CTSFQ9UBX1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTSFQ9UBX1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CTSFQ9UBX1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CTSFQ9UBX1 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
CTSFQ9UBX1 RNU6-636P-201ENST00000384598 107 ntBASIC2.27□□□□□ -2.05
CTSFQ9UBX1 RNU6-114P-201ENST00000384704 105 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms