Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU4-91P-201ENST00000364778 135 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 MT-TH-201ENST00000387441 69 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AL358075.3-201ENST00000426289 226 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 HMGB3P12-201ENST00000438745 556 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 UQCRHP3-201ENST00000451503 251 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 CECR9-201ENST00000453421 199 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 FABP5P15-201ENST00000453566 214 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 RPL36AP51-201ENST00000487216 318 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AC010587.1-201ENST00000505809 469 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 RNA5SP165-201ENST00000517142 115 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 PSMA2P1-201ENST00000526365 646 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AC010653.1-201ENST00000571108 881 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AC008088.1-201ENST00000580993 280 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AL442067.2-201ENST00000614033 363 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 AL589994.2-201ENST00000621124 579 ntBASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.37□□□□□ -1.87
BLOC1S4Q9NUP1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 RNU2-36P-201ENST00000410361 191 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 MTND4P25-201ENST00000441039 533 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC128713.1-201ENST00000471495 306 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 RPL39P36-201ENST00000490784 156 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-677P-201ENST00000516914 101 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 RNA5SP471-201ENST00000516971 106 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 RNA5SP337-201ENST00000517007 109 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC007834.2-201ENST00000536310 343 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC037471.2-201ENST00000564941 598 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC109446.2-201ENST00000567872 497 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 HMGN2P15-201ENST00000585707 270 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC020895.1-201ENST00000595362 272 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 BNIP3P9-201ENST00000603714 553 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AL365204.3-201ENST00000612448 685 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 Z99129.2-201ENST00000619967 314 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC097520.1-201ENST00000624435 385 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 AC019226.2-201ENST00000625973 424 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
BLOC1S4Q9NUP1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC073343.1-201ENST00000328239 651 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 RNU6-512P-201ENST00000364438 103 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 CYCSP46-201ENST00000423569 204 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC098614.2-201ENST00000426040 255 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 RPL36AP53-201ENST00000432891 316 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 USP9YP15-201ENST00000442391 422 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 snoU109.1-201ENST00000459339 135 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 RN7SKP43-201ENST00000516173 320 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 BNIP3P33-201ENST00000598912 569 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AL355877.2-201ENST00000603670 358 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AL358072.1-201ENST00000604156 575 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC007363.1-201ENST00000604736 620 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC121247.2-201ENST00000604776 136 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC007619.2-201ENST00000605743 379 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC068276.1-201ENST00000605793 379 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 UCA1.1-201ENST00000620952 75 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 AC138915.1-201ENST00000565427 1685 ntBASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BLOC1S4Q9NUP1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms