Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC024341.1-201ENST00000526444 1552 ntBASIC1□□□□□ -2.25
CDC42SE1Q9NRR8 AC016717.2-201ENST00000609089 5141 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 NACAP2-201ENST00000318548 624 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-188P-201ENST00000364207 107 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA70.4-201ENST00000365509 134 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 Z98749.2-208ENST00000381646 500 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA54-201ENST00000384281 123 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA67.4-201ENST00000384688 142 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA48.7-201ENST00000391302 135 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL138827.1-201ENST00000402666 306 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 MIR1283-2-201ENST00000408621 87 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL353621.1-201ENST00000418219 243 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SDAD1P3-201ENST00000427380 333 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL117339.2-201ENST00000430475 180 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 RAB6C-AS1-202ENST00000433431 123 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC005019.1-201ENST00000436455 431 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC118469.1-201ENST00000442943 488 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 RPL21P23-201ENST00000446654 460 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC011005.2-201ENST00000487324 359 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 RPL22P13-201ENST00000493291 347 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 RN7SKP24-201ENST00000515888 284 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA25.11-201ENST00000515935 105 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC023538.1-201ENST00000534576 736 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 OR6C7P-201ENST00000547875 934 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 MRPS36P5-201ENST00000551909 298 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC074050.1-201ENST00000563247 211 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC012213.3-201ENST00000577199 777 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AF038458.1-201ENST00000588406 262 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 BNIP3P25-201ENST00000596023 559 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL445435.1-201ENST00000604232 665 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL118508.4-201ENST00000624142 1176 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AL161722.3-201ENST00000605789 2983 ntBASIC0.99□□□□□ -2.25
CDC42SE1Q9NRR8 AP005901.5-201ENST00000545779 1796 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 CDC27P3-201ENST00000635418 1910 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-223P-201ENST00000362830 107 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNU1-23P-201ENST00000363361 144 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNA5SP50-201ENST00000363731 107 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-658P-201ENST00000384606 106 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC092642.1-201ENST00000392417 425 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AL033519.2-201ENST00000403958 392 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-628P-201ENST00000410675 107 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 UBE2FP1-201ENST00000416536 447 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 BTF3L4P3-201ENST00000418879 476 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MTCO3P46-201ENST00000425787 232 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 C1DP1-201ENST00000426049 402 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 UBE2D3P3-201ENST00000426992 425 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 USP9YP24-201ENST00000434374 697 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RSU1P2-202ENST00000437884 485 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MTND4P6-201ENST00000438297 472 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MTND5P14-201ENST00000441481 1267 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 USP9YP8-201ENST00000441913 500 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MTND1P31-201ENST00000449206 961 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 CYP2C59P-201ENST00000457790 269 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RPL7P43-201ENST00000478876 753 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RPS15AP36-201ENST00000492022 382 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC139453.3-201ENST00000493276 369 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC093752.1-206ENST00000511823 336 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC110760.3-202ENST00000515177 371 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-581P-201ENST00000516214 105 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms