Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC096577.2-201ENST00000611455 153 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AL450472.3-201ENST00000615578 367 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 CR381653.2-201ENST00000624041 768 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AL160394.1-201ENST00000624765 724 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC019226.1-201ENST00000625666 515 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AL157786.1-207ENST00000627771 695 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MIR6863-201ENST00000636112 90 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC066616.2-201ENST00000559334 1481 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 MIR208A-201ENST00000362287 71 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU5E-8P-201ENST00000363502 116 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU6-1074P-201ENST00000383995 104 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU6-278P-201ENST00000390945 109 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU6-882P-201ENST00000391025 103 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AL109755.1-201ENST00000401791 649 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU4-65P-201ENST00000410473 140 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU4-55P-201ENST00000410731 137 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU2-62P-201ENST00000410868 191 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 EIF1P1-201ENST00000421436 341 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC137499.1-201ENST00000427602 88 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC073464.1-201ENST00000429823 534 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 MTATP6P13-201ENST00000438531 667 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC005094.1-201ENST00000440420 368 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AL662791.1-201ENST00000441992 928 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC078817.1-201ENST00000492623 435 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC011352.1-201ENST00000512300 793 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC010493.1-201ENST00000513479 292 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU6-314P-201ENST00000516574 104 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 RNU6-1220P-201ENST00000517126 108 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 FAM60DP-201ENST00000524174 632 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AP003072.2-201ENST00000527756 676 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC125611.2-201ENST00000551907 647 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC010928.3-201ENST00000587712 541 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AP000860.1-201ENST00000605250 559 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC103710.2-201ENST00000609912 942 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 AL442067.2-201ENST00000614033 363 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 PLCE1P1-201ENST00000622094 305 ntBASIC3.07□□□□□ -1.92
SIX2Q9NPC8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX2Q9NPC8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 XIAPP3-201ENST00000312918 795 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RNU6-169P-201ENST00000365336 107 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 MTCO3P40-201ENST00000392516 676 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 EI24P1-201ENST00000416584 867 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC079780.1-201ENST00000428259 207 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 FCF1P1-201ENST00000432690 571 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC090774.1-201ENST00000435925 246 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AL121871.1-201ENST00000443413 436 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 NIPA2P5-201ENST00000452282 464 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AP000873.1-201ENST00000463987 400 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC010285.1-201ENST00000470580 392 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RPS4XP13-201ENST00000483219 789 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RPS3AP14-201ENST00000483907 780 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC007182.2-201ENST00000489251 402 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RNA5SP341-201ENST00000516261 117 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RNU6-64P-201ENST00000517119 105 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 RN7SKP57-201ENST00000517248 293 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 HMGN1P28-201ENST00000521340 364 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.06□□□□□ -1.92
SIX2Q9NPC8 MIR4293-201ENST00000584305 78 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 BNIP3P33-201ENST00000598912 569 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC008277.2-201ENST00000605196 797 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AL136363.1-201ENST00000605349 337 ntBASIC3.06□□□□□ -1.92
SIX2Q9NPC8 AC005046.1-201ENST00000608515 625 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms