Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC107016.1-201ENST00000550463 337 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC007424.1-203ENST00000554613 687 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AL121576.1-201ENST00000556055 276 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 MIR3941-201ENST00000582572 103 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC008521.1-201ENST00000587471 187 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 AP001330.4-201ENST00000604350 154 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AC010338.1-201ENST00000621823 717 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 AL357559.1-201ENST00000622228 274 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.26□□□□□ -1.73
VTA1Q9NP79 U6.105-201ENST00000637379 88 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 AL354685.2-201ENST00000448218 1447 ntBASIC4.26□□□□□ -1.73
VTA1Q9NP79 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VTA1Q9NP79 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 RNA5SP72-201ENST00000364442 117 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 RNU6-767P-201ENST00000384132 107 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AL592114.1-201ENST00000403842 483 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 RNA5SP239-201ENST00000410218 129 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 RPS6P12-201ENST00000432491 726 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 KCTD9P3-201ENST00000434597 1169 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AL118520.1-201ENST00000450770 291 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 FABP5P13-201ENST00000452144 328 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 RPS20P22-201ENST00000473700 357 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 RN7SL293P-201ENST00000481765 281 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 RPL31P61-201ENST00000496160 376 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC114786.4-201ENST00000508771 728 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC098799.2-201ENST00000509466 868 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC107294.1-201ENST00000609524 467 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 AC104260.1-201ENST00000616660 539 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 uc_338.34-201ENST00000617467 174 ntBASIC4.25□□□□□ -1.73
VTA1Q9NP79 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.25□□□□□ -1.73
VTA1Q9NP79 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VTA1Q9NP79 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNU6-38P-201ENST00000384085 107 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNU6-14P-201ENST00000384630 106 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNU6-510P-201ENST00000391239 108 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNU4-26P-201ENST00000410270 107 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 RPL30P2-201ENST00000414021 291 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 MTND1P11-201ENST00000456661 876 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 AL162395.1-201ENST00000457882 422 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 SNORD105B-201ENST00000458770 79 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNU6-333P-201ENST00000459117 107 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 AP000926.1-201ENST00000479573 241 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RPS26P15-201ENST00000488067 348 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC008628.2-201ENST00000502605 298 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 MTCO2P30-201ENST00000503662 364 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC079140.5-201ENST00000507882 310 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC114781.4-201ENST00000513707 639 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNA5SP468-201ENST00000516782 93 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 SUMO2P20-201ENST00000520803 283 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 OR5B10P-201ENST00000532869 642 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.24□□□□□ -1.73
VTA1Q9NP79 MIR3922-201ENST00000585192 84 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 AL161756.2-201ENST00000604597 246 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 RNU6-89P-201ENST00000606519 100 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.24□□□□□ -1.73
VTA1Q9NP79 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.24□□□□□ -1.73
VTA1Q9NP79 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 AL049781.1-201ENST00000623195 3585 ntBASIC4.24□□□□□ -1.73
VTA1Q9NP79 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTA1Q9NP79 AC008568.2-201ENST00000623862 2313 ntBASIC4.23□□□□□ -1.73
VTA1Q9NP79 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.23□□□□□ -1.73
VTA1Q9NP79 MTCO1P12-201ENST00000414273 1543 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms