Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSU72Q9NP77 Y_RNA.117-201ENST00000363294 101 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU4-50P-201ENST00000364361 141 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU6-1179P-201ENST00000384667 107 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 MIR625-201ENST00000385047 85 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU1-82P-201ENST00000390851 165 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 AL513475.1-201ENST00000406602 315 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU2-33P-201ENST00000410344 192 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RN7SKP106-201ENST00000410832 272 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU2-14P-201ENST00000411053 191 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 RPS15AP6-201ENST00000420703 385 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SSU72Q9NP77 HMGB1P27-201ENST00000431429 603 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC092573.2-201ENST00000434546 243 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RPL29P29-201ENST00000448725 423 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC098869.1-201ENST00000481627 292 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 HMGN1P11-201ENST00000508668 303 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU6-927P-201ENST00000516199 100 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNU6-406P-201ENST00000516470 107 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 RNA5SP360-201ENST00000516555 118 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 SNORA40.15-201ENST00000516884 107 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC107918.3-201ENST00000533272 382 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC092490.3-201ENST00000545370 572 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 TRAV37-201ENST00000553906 342 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC068446.3-201ENST00000555285 382 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AL161713.1-201ENST00000555538 145 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC004584.2-201ENST00000570407 410 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 MIR5696-201ENST00000578474 85 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 SNORD95-201ENST00000579879 68 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 AL391358.1-201ENST00000605342 190 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC093799.2-201ENST00000610062 578 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 AC137590.2-201ENST00000619709 240 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 MIR1910-201ENST00000636955 80 ntBASIC4.59□□□□□ -1.67
SSU72Q9NP77 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSU72Q9NP77 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSU72Q9NP77 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 AP000560.1-201ENST00000624150 1937 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSU72Q9NP77 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSU72Q9NP77 RN7SKP162-201ENST00000363605 345 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 RNU6-384P-201ENST00000364900 104 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 RNU6-611P-201ENST00000384276 104 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 Y_RNA.539-201ENST00000384635 107 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 AL591034.2-201ENST00000402839 359 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 RNA5SP104-201ENST00000410989 118 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 H2AFZP5-201ENST00000446960 382 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 RPL12P20-201ENST00000475538 479 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 AC140172.1-201ENST00000502928 141 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 RN7SKP92-201ENST00000517266 244 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 AC010900.2-201ENST00000604508 210 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 FAM27B-201ENST00000610601 213 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.58□□□□□ -1.68
SSU72Q9NP77 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSU72Q9NP77 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSU72Q9NP77 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSU72Q9NP77 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSU72Q9NP77 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 Y_RNA.20-201ENST00000362479 113 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 RNU6-1317P-201ENST00000364582 104 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 RNU1-63P-201ENST00000383902 164 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 Y_RNA.526-201ENST00000384572 110 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 MIR153-1-201ENST00000384914 90 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 EIF4EP2-201ENST00000422816 654 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 CKS1BP5-201ENST00000434172 273 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 MTND5P15-201ENST00000434246 349 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 HIGD1AP2-201ENST00000446367 280 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.57□□□□□ -1.68
SSU72Q9NP77 AURKAPS2-201ENST00000454983 333 ntBASIC4.57□□□□□ -1.68
SSU72Q9NP77 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms