Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC012213.3-201ENST00000577199 777 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 MIR3913-1-201ENST00000577744 102 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC087683.1-201ENST00000591187 441 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AL137843.1-201ENST00000605078 385 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC104073.3-201ENST00000610942 955 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC034102.8-201ENST00000615146 484 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC006111.3-201ENST00000622137 383 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 AC007998.5-201ENST00000622938 237 ntBASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1BQ9H9Y6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 Y_RNA.359-201ENST00000365498 102 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 Y_RNA.436-201ENST00000384097 102 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 MIR558-201ENST00000384920 94 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-817P-201ENST00000391083 104 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC007283.2-201ENST00000424739 197 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC092573.2-201ENST00000434546 243 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 BNIP3P2-201ENST00000441221 577 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 PIGFP3-201ENST00000441918 722 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 MTATP6P30-201ENST00000443540 664 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AL671855.1-201ENST00000446875 1203 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AP002884.2-201ENST00000471647 395 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 RPS3AP14-201ENST00000483907 780 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 RN7SL504P-201ENST00000494496 287 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 RPL23AP94-201ENST00000512518 302 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 SNORA64.4-201ENST00000516632 81 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-405P-201ENST00000516637 110 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 HMGB1P6-201ENST00000569046 646 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 MIR5004-201ENST00000579078 107 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 MIR3609-201ENST00000582661 80 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 NDUFA8P1-201ENST00000605525 367 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC099778.2-201ENST00000610904 211 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC091834.1-201ENST00000614543 472 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC099842.1-201ENST00000619919 596 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 AC068137.4-201ENST00000638485 296 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 OR5H6-203ENST00000642105 978 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 Z83843.1-201ENST00000604070 3685 ntBASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1BQ9H9Y6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RNA5SP374-201ENST00000362939 125 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-169P-201ENST00000365336 107 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-701P-201ENST00000384059 107 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 Y_RNA.559-201ENST00000384686 107 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RNU2-16P-201ENST00000410712 136 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC133104.1-201ENST00000429100 218 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AL512844.2-201ENST00000433990 593 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC079781.2-201ENST00000446424 169 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-953P-201ENST00000459154 107 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RPL37P6-201ENST00000460682 294 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 HMGN2P13-201ENST00000476476 274 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 SNORA31.1-201ENST00000515993 133 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 SNORA31.5-201ENST00000516190 133 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 RNU6-579P-201ENST00000516879 102 ntBASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR1BQ9H9Y6 AMZ2P1-203ENST00000565833 850 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms