Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDT1Q9H211 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.55□□□□□ -1.84
CDT1Q9H211 SNORA38.1-201ENST00000364172 131 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
CDT1Q9H211 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDT1Q9H211 UBE2FP1-201ENST00000416536 447 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 ELOCP4-201ENST00000420090 333 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AL139413.1-201ENST00000421309 217 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CDT1Q9H211 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.55□□□□□ -1.84
CDT1Q9H211 RPL21P66-201ENST00000426566 466 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AC133104.1-201ENST00000429100 218 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AC004866.2-201ENST00000438285 481 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AL136380.1-201ENST00000447970 162 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.55□□□□□ -1.84
CDT1Q9H211 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDT1Q9H211 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AC026427.2-201ENST00000506228 536 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.55□□□□□ -1.84
CDT1Q9H211 Y_RNA.693-201ENST00000516641 110 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 Y_RNA.702-201ENST00000516843 96 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 RNU6-1073P-201ENST00000517182 106 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.55□□□□□ -1.84
CDT1Q9H211 HMGN1P28-201ENST00000521340 364 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AP001646.1-201ENST00000527936 915 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AC109635.4-202ENST00000531666 412 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AL136363.1-201ENST00000605349 337 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.55□□□□□ -1.84
CDT1Q9H211 AL157817.1-201ENST00000614264 790 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDT1Q9H211 AC004925.1-201ENST00000624256 2706 ntBASIC3.55□□□□□ -1.84
CDT1Q9H211 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.54□□□□□ -1.84
CDT1Q9H211 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CDT1Q9H211 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 AC058791.1-201ENST00000608412 3198 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU6-797P-201ENST00000363101 109 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU6-169P-201ENST00000365336 107 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU6-876P-201ENST00000391295 104 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU4-65P-201ENST00000410473 140 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU2-62P-201ENST00000410868 191 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RPL30P2-201ENST00000414021 291 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 ZNF863P-201ENST00000426746 417 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.54□□□□□ -1.84
CDT1Q9H211 MTND3P23-201ENST00000431980 347 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 USP12PX-201ENST00000432383 1057 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC090774.1-201ENST00000435925 246 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC093156.1-201ENST00000440382 670 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC115115.1-201ENST00000449927 248 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU6-420P-201ENST00000458780 107 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 MTCO2P29-201ENST00000465212 189 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC007182.2-201ENST00000489251 402 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.54□□□□□ -1.84
CDT1Q9H211 AC004062.1-201ENST00000509926 645 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RNU6-64P-201ENST00000517119 105 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RN7SKP57-201ENST00000517248 293 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.54□□□□□ -1.84
CDT1Q9H211 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.54□□□□□ -1.84
CDT1Q9H211 AC104383.1-201ENST00000530297 370 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.54□□□□□ -1.84
CDT1Q9H211 AL845331.3-202ENST00000562856 261 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 MIR2682-201ENST00000580305 110 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC012493.2-201ENST00000595083 291 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.54□□□□□ -1.84
CDT1Q9H211 C8orf59P2-201ENST00000603441 271 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 BNIP3P9-201ENST00000603714 553 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AL353621.2-201ENST00000605340 133 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC103710.2-201ENST00000609912 942 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AL020991.1-201ENST00000612314 373 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC025253.1-201ENST00000613623 543 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC139792.3-201ENST00000623525 224 ntBASIC3.54□□□□□ -1.84
CDT1Q9H211 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDT1Q9H211 AC138915.3-201ENST00000562908 1389 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDT1Q9H211 AC010733.2-201ENST00000589496 5702 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDT1Q9H211 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.53□□□□□ -1.84
CDT1Q9H211 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDT1Q9H211 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.53□□□□□ -1.84
CDT1Q9H211 Y_RNA.111-201ENST00000363248 100 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AP002088.1-201ENST00000382740 395 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDT1Q9H211 RNA5SP107-201ENST00000411358 122 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.53□□□□□ -1.84
CDT1Q9H211 USP9YP27-201ENST00000418455 438 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 MTCO1P39-201ENST00000426148 480 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 TIMM9P3-201ENST00000428659 274 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms