Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MTND5P41-201ENST00000517498 206 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 IGLVIV-53-201ENST00000520107 367 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC022559.1-201ENST00000520905 205 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC092490.3-201ENST00000545370 572 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 RN7SL176P-201ENST00000580352 264 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC011447.4-201ENST00000587562 111 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.34□□□□□ -1.56
NUCKS1Q9H1E3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
NUCKS1Q9H1E3 HAUS6P2-201ENST00000433254 2404 ntBASIC5.34□□□□□ -1.56
NUCKS1Q9H1E3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
NUCKS1Q9H1E3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NUCKS1Q9H1E3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUCKS1Q9H1E3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC008758.3-201ENST00000507003 1829 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-595P-201ENST00000363944 107 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 SNORA58B-201ENST00000364259 136 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-47P-201ENST00000383866 107 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 SNORA66-201ENST00000384792 133 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-735P-201ENST00000410612 107 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 Y_RNA.626-201ENST00000411288 95 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RPS26P2-201ENST00000440331 348 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC073850.1-201ENST00000449243 255 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC022431.1-201ENST00000450941 438 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RPL21P104-201ENST00000464143 478 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC091021.1-201ENST00000468051 388 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-390P-201ENST00000516259 103 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RN7SKP66-201ENST00000516681 231 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 MIR5692A1-201ENST00000580523 69 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC105254.2-201ENST00000603636 436 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC073657.2-201ENST00000605661 303 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 SNORD39.4-201ENST00000620099 78 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 AC092079.1-201ENST00000558620 1985 ntBASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NUCKS1Q9H1E3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-288P-201ENST00000363690 104 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 SNORA74A-201ENST00000364089 198 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 U3.35-201ENST00000408405 208 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC092573.2-201ENST00000434546 243 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 PSMD10P3-201ENST00000437000 448 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AL360271.2-201ENST00000447710 161 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC234775.1-201ENST00000454247 670 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 SEPT14P8-201ENST00000508026 178 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 COX6B1P5-201ENST00000509843 249 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC004980.4-201ENST00000513375 203 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 SYF2P1-201ENST00000550658 413 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC072026.1-201ENST00000605023 201 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 AC019206.1-201ENST00000621938 425 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 U6.92-201ENST00000636464 89 ntBASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.32□□□□□ -1.56
NUCKS1Q9H1E3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 RNA5SP305-201ENST00000362665 119 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 Y_RNA.304-201ENST00000365011 112 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-804P-201ENST00000384286 107 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 RN7SKP51-201ENST00000410781 304 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC017079.2-201ENST00000416102 485 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC093162.1-201ENST00000419682 124 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 RPL30P3-201ENST00000424262 333 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 RN7SL244P-201ENST00000493405 297 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms