Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
UBE2OQ9C0C9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.21□□□□□ -1.57
UBE2OQ9C0C9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
UBE2OQ9C0C9 AL049555.1-201ENST00000562834 1933 ntBASIC5.21□□□□□ -1.57
UBE2OQ9C0C9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 RNU6-371P-201ENST00000364283 108 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 SNORA71.2-201ENST00000364941 134 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.471-201ENST00000384312 102 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 ENSAP1-201ENST00000392855 326 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL590704.1-201ENST00000402856 794 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL357515.1-201ENST00000402967 542 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 RNU6-1203P-201ENST00000410703 110 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 RNU6-130P-201ENST00000411112 103 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL030996.1-201ENST00000411430 235 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 UBE2D3P2-201ENST00000424409 445 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL589765.3-201ENST00000446084 462 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 RPL21P126-201ENST00000470049 478 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 VN1R105P-201ENST00000486595 910 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AC091868.1-201ENST00000508746 304 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.687-201ENST00000516558 91 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 RNU6-677P-201ENST00000516914 101 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 RN7SKP60-201ENST00000516985 239 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 MIR3133-201ENST00000583157 78 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AC007566.2-201ENST00000603642 413 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AL591034.3-201ENST00000605511 685 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AC127459.3-201ENST00000624328 466 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 EOGT-210ENST00000615922 1931 ntBASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
UBE2OQ9C0C9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 AC027287.1-201ENST00000553115 1453 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SPRR2C-201ENST00000290702 219 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MIR335-201ENST00000362173 94 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.84-201ENST00000363011 104 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.183-201ENST00000363882 113 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.291-201ENST00000364886 113 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 Y_RNA.464-201ENST00000384282 110 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SAR1AP2-201ENST00000392696 594 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RN7SKP267-201ENST00000410381 285 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RPS15AP40-201ENST00000419621 391 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RPEP5-201ENST00000441137 268 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RPL21P41-201ENST00000459863 264 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 HMGB1P25-201ENST00000468402 607 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 AC098869.1-201ENST00000481627 292 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 NDUFB4P9-201ENST00000511646 388 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RNU1-6P-201ENST00000516290 144 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RNU6-352P-201ENST00000516908 107 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 AC144568.1-201ENST00000520139 137 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 RN7SL176P-201ENST00000580352 264 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 AC073410.2-201ENST00000603240 332 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MIR1244-1-201ENST00000612829 85 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SNX18P1Y-201ENST00000616231 511 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MIR1244-3-201ENST00000635744 85 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MIR1244-2-201ENST00000636449 85 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MIR1244-4-202ENST00000636813 85 ntBASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.2□□□□□ -1.58
UBE2OQ9C0C9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms