Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RN7SKP272-201ENST00000516988 232 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC022690.1-201ENST00000526681 550 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL133153.1-201ENST00000557756 303 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC137800.2-201ENST00000574375 120 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC012213.3-201ENST00000577199 777 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 NDUFA8P1-201ENST00000605525 367 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL451064.1-201ENST00000607718 471 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC103591.3-201ENST00000608684 209 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC245517.5-201ENST00000611529 162 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC122108.2-201ENST00000611946 526 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 uc_338.12-201ENST00000616344 181 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
CCDC28BQ9BUN5 AC005832.2-201ENST00000538921 1430 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RNU5E-8P-201ENST00000363502 116 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 Y_RNA.359-201ENST00000365498 102 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RNU6-76P-201ENST00000384060 104 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 MIR554-201ENST00000384874 96 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL589872.1-201ENST00000426602 288 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC079780.1-201ENST00000428259 207 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL159987.2-201ENST00000432754 307 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC024082.2-201ENST00000434771 238 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 GAPDHP17-201ENST00000449858 1001 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RPL23AP31-201ENST00000456160 467 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC091153.1-201ENST00000466297 402 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RPS23P3-201ENST00000470993 430 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 MTND1P3-201ENST00000484956 952 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC105914.1-201ENST00000511798 226 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RN7SKP298-201ENST00000515950 94 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RNU2-46P-201ENST00000517038 113 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RNU1-45P-201ENST00000517191 141 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC107934.1-201ENST00000522215 217 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AP003181.2-201ENST00000528941 181 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 DEFB108A-201ENST00000530110 222 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 SNRPGP16-201ENST00000533275 226 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 HPRT1P3-201ENST00000539521 576 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC106785.1-201ENST00000565935 262 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AGGF1P4-201ENST00000568249 801 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AP001029.3-201ENST00000588063 596 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL606834.2-201ENST00000602954 668 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC006566.1-201ENST00000608943 513 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC108747.1-201ENST00000609508 535 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL589743.7-201ENST00000612637 233 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AC091953.2-201ENST00000623979 160 ntBASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
CCDC28BQ9BUN5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC096644.4-201ENST00000563417 2912 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 U8.3-201ENST00000363321 132 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 RPL23AP32-201ENST00000395315 459 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 MIR1193-201ENST00000408109 78 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC137499.1-201ENST00000427602 88 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL513043.1-201ENST00000439124 535 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 RN7SL601P-201ENST00000471221 293 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms