Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL356010.1-201ENST00000456364 102 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RN7SL807P-201ENST00000470923 297 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 VN1R17P-201ENST00000472048 1090 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 FAM92A1P2-202ENST00000504766 877 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC108078.2-201ENST00000510750 236 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 SNORD27.1-201ENST00000516319 72 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RN7SKP258-201ENST00000517151 304 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RN7SKP289-201ENST00000517244 295 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 MIR4276-201ENST00000584832 70 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 NRBF2P5-201ENST00000603087 788 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC104763.2-201ENST00000604179 382 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC106900.2-201ENST00000604994 317 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 SNORA24.1-201ENST00000384401 135 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 MTND4P25-201ENST00000441039 533 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RNU6-953P-201ENST00000459154 107 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RPL31P60-201ENST00000478450 367 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RN7SL504P-201ENST00000494496 287 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC105417.1-201ENST00000514691 285 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RNA5SP401-201ENST00000515920 127 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 SNORA40.12-201ENST00000516329 111 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RNA5SP468-201ENST00000516782 93 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AP006587.4-201ENST00000526053 529 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AL360157.1-201ENST00000565962 87 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 MIR3690-201ENST00000580266 75 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AP001029.3-201ENST00000588063 596 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC008752.3-201ENST00000588113 712 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC005000.2-201ENST00000605468 310 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC002553.4-201ENST00000616896 331 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 MIR8057-201ENST00000620957 69 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 YWHAEP7-203ENST00000622054 312 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 MIR4727-201ENST00000622232 55 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 CKAP2P1-201ENST00000555477 2049 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 API5P2-201ENST00000397055 1498 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AC032011.1-201ENST00000611703 1549 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 AL137003.2-201ENST00000606924 2538 ntBASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PAAF1Q9BRP4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 NACAP2-201ENST00000318548 624 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 RNU6-1287P-201ENST00000362914 107 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 RNU6-1060P-201ENST00000384664 107 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AL513331.1-201ENST00000411908 397 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 Z99755.1-201ENST00000414048 380 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 BTF3L4P3-201ENST00000418879 476 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 ZNF90P2-204ENST00000419323 1075 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC006989.1-201ENST00000427212 131 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AL590383.1-201ENST00000428602 75 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC233702.1-201ENST00000482905 502 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 PRDX4P1-201ENST00000507189 574 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 PHBP14-201ENST00000512887 367 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 RNU6-677P-201ENST00000516914 101 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 OR5BN1P-201ENST00000532955 829 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC012493.2-201ENST00000595083 291 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms