Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FABP5P13-201ENST00000452144 328 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 HMGN2P7-201ENST00000456186 273 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC083904.1-201ENST00000487828 231 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AF213884.1-201ENST00000488102 463 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 FAM206BP-201ENST00000510179 541 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNA5SP315-201ENST00000516340 116 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNA5SP312-201ENST00000517068 116 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 GNRHR2P1-201ENST00000555315 631 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC012182.1-201ENST00000570133 895 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC092807.2-201ENST00000609367 243 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 RMST_8.1-201ENST00000610287 165 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC104237.2-201ENST00000612456 443 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC007998.5-201ENST00000622938 237 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SNX18Q96RF0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 AL137003.2-201ENST00000606924 2538 ntBASIC3.64□□□□□ -1.83
SNX18Q96RF0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX18Q96RF0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 Y_RNA.419-201ENST00000384041 102 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 RNU6-550P-201ENST00000391057 101 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 HSPE1P1-201ENST00000421494 318 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AL358472.1-201ENST00000431295 329 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 OR4C10P-201ENST00000434991 931 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 PRPS1P1-201ENST00000445305 876 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 RPL21P8-201ENST00000465083 535 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC110792.1-201ENST00000491826 472 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC117522.3-201ENST00000507974 584 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC098591.2-201ENST00000510152 315 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 RNU6-123P-201ENST00000516163 102 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AL137161.1-201ENST00000532231 390 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AC008521.1-201ENST00000587471 187 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AP003400.5-201ENST00000624827 617 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 AL133216.2-202ENST00000634512 349 ntBASIC3.63□□□□□ -1.83
SNX18Q96RF0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX18Q96RF0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX18Q96RF0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 RNU1-64P-201ENST00000365443 163 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 RNU1-13P-201ENST00000384499 162 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 RNU4-46P-201ENST00000410818 138 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 RNU6-387P-201ENST00000411331 105 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 COX6B1P7-201ENST00000430845 235 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 KCTD9P3-201ENST00000434597 1169 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 NEFMP1-201ENST00000443423 1006 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 HMGN2P21-201ENST00000447764 270 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL118496.2-201ENST00000448300 230 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms