Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNA5SP455-201ENST00000365190 119 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.412-201ENST00000384001 104 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 EBAG9P1-201ENST00000418955 543 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 MRPL48P1-201ENST00000445390 636 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 RNU7-121P-201ENST00000516604 62 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 AC099506.2-201ENST00000623074 221 ntBASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC107027.3-201ENST00000565095 3473 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC139713.2-214ENST00000642059 1811 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-249P-201ENST00000363016 102 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.324-201ENST00000365165 102 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 OR1L6-202ENST00000373684 1044 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.446-201ENST00000384178 104 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 RPL30P13-201ENST00000418873 348 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 RPL12P46-201ENST00000436610 195 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AL358232.1-201ENST00000448030 501 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC112187.1-201ENST00000455837 479 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 COX6B1P5-201ENST00000509843 249 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC115990.1-201ENST00000526957 301 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 RPL21P9-201ENST00000556149 474 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 MIR4423-201ENST00000580922 80 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC123912.5-201ENST00000605470 343 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 MIR6129-201ENST00000616087 109 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC006133.1-201ENST00000617106 264 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 MAPK10-338ENST00000641647 3362 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC114774.1-201ENST00000507410 1770 ntBASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNTNAP3BQ96NU0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MIR410-201ENST00000362222 80 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.136-201ENST00000363444 102 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-1155P-201ENST00000363554 107 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 SNORA16A-201ENST00000384342 137 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MIR578-201ENST00000384828 96 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RN7SKP114-201ENST00000410327 279 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 HMGB1P27-201ENST00000431429 603 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 snoU13.24-201ENST00000458998 104 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RN7SL352P-201ENST00000466002 277 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 AC010618.1-201ENST00000469924 477 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RPS27AP9-201ENST00000477681 438 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-1095P-201ENST00000516148 108 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RNA5SP143-201ENST00000516936 115 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 RN7SKP258-201ENST00000517151 304 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 SUMO2P18-201ENST00000518873 252 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 AK6P2-201ENST00000549020 471 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 OR4H12P-201ENST00000556269 907 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MIR4715-201ENST00000584117 79 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MIR132-201ENST00000591554 101 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MIR6716-201ENST00000613413 80 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 U73479.1-201ENST00000618062 168 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 MTND5P32-201ENST00000560711 1802 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 AC100757.1-201ENST00000616872 1835 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms