Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC105417.1-201ENST00000514691 285 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 Y_RNA.702-201ENST00000516843 96 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 RN7SKP60-201ENST00000516985 239 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC093331.1-201ENST00000521474 169 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AP006587.4-201ENST00000526053 529 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 PSMA2P1-201ENST00000526365 646 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC093012.1-202ENST00000549403 582 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AL138976.2-201ENST00000563989 694 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC006116.10-201ENST00000591836 581 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC007619.2-201ENST00000605743 379 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 MIR8058-201ENST00000615737 89 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC010133.1-201ENST00000615809 842 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 PLCE1P1-201ENST00000622094 305 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 MTND5P17-201ENST00000418405 1603 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC004972.1-201ENST00000623934 2209 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS50Q96JG6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS50Q96JG6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 ASNSP3-201ENST00000451989 1306 ntBASIC3.71□□□□□ -1.81
VPS50Q96JG6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VPS50Q96JG6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS50Q96JG6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS50Q96JG6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RNU6-179P-201ENST00000363350 107 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS50Q96JG6 RNU6-946P-201ENST00000383878 107 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 Y_RNA.576-201ENST00000384781 102 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RNU6-903P-201ENST00000391270 109 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RPL32P23-201ENST00000397237 405 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 BX323014.1-201ENST00000412876 237 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 DUTP6-201ENST00000425573 462 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 HMGB1P37-201ENST00000439613 609 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 SNRPEP8-201ENST00000442866 260 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 RN7SL432P-201ENST00000484057 298 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RPL39P36-201ENST00000490784 156 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC091951.2-201ENST00000500762 203 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RBBP4P6-201ENST00000508098 202 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC108078.2-201ENST00000510750 236 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RNU6-840P-201ENST00000517275 65 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RNA5SP179-201ENST00000517284 121 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 ERHP1-201ENST00000523006 310 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 SNRPGP16-201ENST00000533275 226 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 AL121576.1-201ENST00000556055 276 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 NCAPGP2-201ENST00000557911 754 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 RN7SL703P-201ENST00000578485 302 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 AP001330.4-201ENST00000604350 154 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AC009994.1-201ENST00000606889 253 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 FRG1KP-201ENST00000623592 341 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.82
VPS50Q96JG6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
VPS50Q96JG6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS50Q96JG6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS50Q96JG6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNU6-50P-201ENST00000362356 103 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNU6-552P-201ENST00000362869 119 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNU4-20P-201ENST00000365601 151 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RNU6-14P-201ENST00000384630 106 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 MIR591-201ENST00000385290 95 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 HLFP1-201ENST00000402375 499 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 RPL21P111-201ENST00000418453 477 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 ATP5JP1-201ENST00000431631 322 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 USP9YP8-201ENST00000441913 500 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 MTND1P18-201ENST00000448191 573 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS50Q96JG6 AC108860.1-201ENST00000484521 383 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 RN7SL323P-201ENST00000494712 295 ntBASIC3.7□□□□□ -1.82
VPS50Q96JG6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS50Q96JG6 HMGN1P11-201ENST00000508668 303 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms