Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU2-69P-201ENST00000516061 100 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.69□□□□□ -1.66
BRF1Q92994 RNU6-988P-201ENST00000519081 107 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.69□□□□□ -1.66
BRF1Q92994 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.69□□□□□ -1.66
BRF1Q92994 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.69□□□□□ -1.66
BRF1Q92994 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF1Q92994 AC067852.3-201ENST00000589177 561 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AC104763.2-201ENST00000604179 382 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AC133104.2-201ENST00000615272 193 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF1Q92994 RLIMP1-201ENST00000339626 1680 ntBASIC4.69□□□□□ -1.66
BRF1Q92994 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF1Q92994 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF1Q92994 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF1Q92994 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF1Q92994 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
BRF1Q92994 MTND5P19-201ENST00000424872 1794 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRF1Q92994 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF1Q92994 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF1Q92994 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF1Q92994 AC068538.1-201ENST00000376856 336 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 RNU6-128P-201ENST00000383976 107 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 Y_RNA.459-201ENST00000384251 102 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 RNU6-601P-201ENST00000384540 107 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
BRF1Q92994 AL022722.2-201ENST00000402519 180 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 RNU4-6P-201ENST00000410804 122 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.68□□□□□ -1.66
BRF1Q92994 RPL31P12-201ENST00000422587 358 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 MTCO3P10-201ENST00000455912 772 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 RPL23AP2-201ENST00000471227 466 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 AC002456.2-201ENST00000509356 380 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 RNU4-60P-201ENST00000517239 135 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF1Q92994 MIR5692C1-201ENST00000585309 91 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 AL590392.1-201ENST00000604960 446 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 AC106900.2-201ENST00000604994 317 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 AP000654.2-201ENST00000605633 586 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.68□□□□□ -1.66
BRF1Q92994 AL078596.1-201ENST00000624856 447 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 MIR492-201ENST00000638676 116 ntBASIC4.68□□□□□ -1.66
BRF1Q92994 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
BRF1Q92994 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.68□□□□□ -1.66
BRF1Q92994 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
BRF1Q92994 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BRF1Q92994 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.67□□□□□ -1.66
BRF1Q92994 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 RNU6-562P-201ENST00000362731 107 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 Y_RNA.133-201ENST00000363428 110 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 RNU6-14P-201ENST00000384630 106 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 RNU6-328P-201ENST00000390887 106 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 RPS26P8-201ENST00000393490 348 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 AL391417.1-201ENST00000404100 426 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 AL669831.1-202ENST00000428504 417 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 NEFMP1-201ENST00000443423 1006 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 RPL30P15-201ENST00000457129 321 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 MTND5P22-201ENST00000458380 195 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.67□□□□□ -1.66
BRF1Q92994 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 RNU6-976P-201ENST00000516086 111 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 RNU6-390P-201ENST00000516259 103 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 HNRNPCP4-201ENST00000571636 900 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.67□□□□□ -1.66
BRF1Q92994 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF1Q92994 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF1Q92994 ATP1B3P1-201ENST00000605365 821 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 AL355365.1-201ENST00000616480 294 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 AC099669.2-201ENST00000616549 437 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 AL591424.2-201ENST00000617023 128 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 RMST_9.1-201ENST00000619945 193 ntBASIC4.67□□□□□ -1.66
BRF1Q92994 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
BRF1Q92994 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
BRF1Q92994 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF1Q92994 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF1Q92994 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BRF1Q92994 RNU6-715P-201ENST00000365204 103 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 SNORA62-201ENST00000365493 153 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 AC117470.1-201ENST00000381974 330 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 SNORA70C-201ENST00000384538 135 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 AL583834.1-201ENST00000406943 343 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RNA5SP317-201ENST00000410176 116 ntBASIC4.66□□□□□ -1.66
BRF1Q92994 RNA5SP311-201ENST00000411290 116 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms