Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RN7SKP164-201ENST00000516138 266 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 RN7SKP288-201ENST00000516227 268 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 SCARNA18.1-201ENST00000516330 83 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 SNORA31.22-201ENST00000517204 135 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS1Q92902 AC100767.1-201ENST00000528178 123 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 AC084851.1-201ENST00000529105 249 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 AC022968.1-201ENST00000567372 442 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 AC011445.2-201ENST00000599274 173 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 AC068768.2-201ENST00000602352 343 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS1Q92902 AC009812.4-201ENST00000569134 1805 ntBASIC5.17□□□□□ -1.58
HPS1Q92902 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.17□□□□□ -1.58
HPS1Q92902 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HPS1Q92902 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS1Q92902 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS1Q92902 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HPS1Q92902 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HPS1Q92902 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.17□□□□□ -1.58
HPS1Q92902 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HPS1Q92902 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HPS1Q92902 NEAT1-202ENST00000501122 22743 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HPS1Q92902 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 SNORA17A-201ENST00000391185 133 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 RN7SKP284-201ENST00000411002 343 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.16□□□□□ -1.58
HPS1Q92902 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.16□□□□□ -1.58
HPS1Q92902 KNOP1P3-201ENST00000446933 426 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 AL121594.1-201ENST00000475906 575 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 RN7SL591P-201ENST00000496150 292 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 RN7SKP238-201ENST00000516483 249 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 RNA5SP434-201ENST00000516647 121 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.16□□□□□ -1.58
HPS1Q92902 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.16□□□□□ -1.58
HPS1Q92902 TRAV28-201ENST00000557548 323 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 MTND5P34-201ENST00000568888 325 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.16□□□□□ -1.58
HPS1Q92902 MIR3614-201ENST00000581261 86 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 U7.2-201ENST00000607576 63 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 SNORA17.5-201ENST00000630429 132 ntBASIC5.16□□□□□ -1.58
HPS1Q92902 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HPS1Q92902 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HPS1Q92902 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HPS1Q92902 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HPS1Q92902 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HPS1Q92902 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HPS1Q92902 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HPS1Q92902 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
HPS1Q92902 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.15□□□□□ -1.58
HPS1Q92902 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HPS1Q92902 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.15□□□□□ -1.58
HPS1Q92902 RNU5A-1-201ENST00000362698 116 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 RNU105B-201ENST00000364478 208 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 RNU6-336P-201ENST00000364891 107 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
HPS1Q92902 RNU1-74P-201ENST00000384108 171 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 MIR10B-201ENST00000385011 110 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS1Q92902 SSXP9-201ENST00000417503 292 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS1Q92902 AL627311.1-201ENST00000431514 115 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS1Q92902 AC016027.4-201ENST00000450866 277 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 AL450023.1-201ENST00000450868 751 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 RN7SL188P-201ENST00000469842 285 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 AC012158.1-204ENST00000483430 465 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 RPL23AP40-201ENST00000487630 390 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
HPS1Q92902 AC010265.1-201ENST00000513509 211 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 GMPSP1-201ENST00000514075 579 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 RNA5SP471-201ENST00000516971 106 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 RNA5SP340-201ENST00000517132 107 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 NDUFA5P6-201ENST00000542110 379 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS1Q92902 BNIP3P5-201ENST00000562290 498 ntBASIC5.15□□□□□ -1.59
HPS1Q92902 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS1Q92902 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS1Q92902 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HPS1Q92902 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS1Q92902 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HPS1Q92902 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HPS1Q92902 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.15□□□□□ -1.59
HPS1Q92902 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HPS1Q92902 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS1Q92902 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HPS1Q92902 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HPS1Q92902 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
HPS1Q92902 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS1Q92902 AC104964.3-201ENST00000606115 2860 ntBASIC5.14□□□□□ -1.59
HPS1Q92902 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms