Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
HERVK_113Q902F9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113Q902F9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113Q902F9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113Q902F9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113Q902F9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 RNA5SP197-201ENST00000363357 119 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 Y_RNA.359-201ENST00000365498 102 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 Y_RNA.436-201ENST00000384097 102 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 RNU6-1119P-201ENST00000384349 108 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 Y_RNA.559-201ENST00000384686 107 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 MIR325-201ENST00000385260 98 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 BX295541.1-201ENST00000417774 250 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 PIGFP2-201ENST00000421400 651 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL353705.1-201ENST00000433468 480 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC087588.1-201ENST00000462203 316 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC010493.1-201ENST00000513479 292 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC010265.1-201ENST00000513509 211 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 CASP1P1-201ENST00000526345 212 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 PSMA2P1-201ENST00000526365 646 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL163153.1-201ENST00000554223 283 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 HMGB1P6-201ENST00000569046 646 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL391840.1-201ENST00000571144 367 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 MIR3913-1-201ENST00000577744 102 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 MIR3609-201ENST00000582661 80 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 DPPA3P3-201ENST00000603842 430 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 BNIP3P10-201ENST00000605360 577 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC104073.3-201ENST00000610942 955 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL589743.7-201ENST00000612637 233 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 HULC.1-201ENST00000612720 240 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AC005332.10-201ENST00000612725 619 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 AL138880.2-201ENST00000616214 239 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.61□□□□□ -1.83
HERVK_113Q902F9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.61□□□□□ -1.83
HERVK_113Q902F9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 Y_RNA.194-201ENST00000363985 102 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 RNU5A-6P-201ENST00000384136 116 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 SNORA48.8-201ENST00000391324 134 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AL139281.1-201ENST00000422120 335 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 RPL21P109-201ENST00000422213 475 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC104651.1-201ENST00000427559 735 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 OR2AS1P-201ENST00000427827 319 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 RPL31P35-201ENST00000431058 377 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 RPL23AP69-201ENST00000431134 458 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 NEK4P1-201ENST00000433383 879 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC079781.2-201ENST00000446424 169 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 MTCO3P20-201ENST00000454926 688 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 HMGB1P41-201ENST00000520234 440 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC093331.1-201ENST00000521474 169 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC022616.3-201ENST00000523940 148 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC135279.1-201ENST00000543493 504 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC011602.1-201ENST00000546484 331 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AL161729.4-201ENST00000604650 476 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AP002360.4-201ENST00000606980 481 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC034102.8-201ENST00000615146 484 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC009509.4-201ENST00000619202 509 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 AC018692.3-201ENST00000623929 123 ntBASIC3.6□□□□□ -1.83
HERVK_113Q902F9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
HERVK_113Q902F9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERVK_113Q902F9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HERVK_113Q902F9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms