Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC112204.3-201ENST00000623822 332 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 MTND1P37-201ENST00000636562 264 ntBASIC2.97□□□□□ -1.93
RTL3Q8N8U3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.97□□□□□ -1.93
RTL3Q8N8U3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 RNU1-35P-201ENST00000362782 153 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 MIR483-201ENST00000385070 76 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 UBA52P6-201ENST00000399822 382 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 MIR1305-201ENST00000408300 86 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 MTCO2P16-201ENST00000436962 677 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 UBBP3-201ENST00000445497 241 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AL360221.1-201ENST00000445989 335 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC082651.2-201ENST00000496833 166 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 POU5F1P7-201ENST00000508759 541 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 MTND5P13-201ENST00000513046 1079 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC024909.2-201ENST00000553035 286 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC012360.2-201ENST00000609349 391 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC091953.5-201ENST00000622919 233 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 MTND4P16-201ENST00000466108 1367 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RTL3Q8N8U3 AC006378.2-201ENST00000623178 2476 ntBASIC2.96□□□□□ -1.94
RTL3Q8N8U3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 RNU4-91P-201ENST00000364778 135 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 RPL5P18-201ENST00000406671 891 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 RPL21P24-201ENST00000413752 448 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 BTF3L4P1-201ENST00000413813 468 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 RPS27AP14-201ENST00000422868 454 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 RPL7P37-201ENST00000425095 738 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AL445669.1-201ENST00000426743 755 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC009414.1-201ENST00000427200 443 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 USP12PX-201ENST00000432383 1057 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC010153.1-201ENST00000432862 727 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 FAM103A2P-201ENST00000444122 354 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 COX6CP2-201ENST00000444980 225 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 NIPA2P5-201ENST00000452282 464 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AL160314.1-201ENST00000490836 438 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AP004247.1-201ENST00000531556 1289 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 MIR544B-201ENST00000582372 78 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 BNIP3P23-201ENST00000599655 511 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AL355877.2-201ENST00000603670 358 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC097468.3-201ENST00000607956 456 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC025594.3-201ENST00000613068 790 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC010338.1-201ENST00000621823 717 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC139792.2-201ENST00000624218 587 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 MTND5P19-201ENST00000424872 1794 ntBASIC2.95□□□□□ -1.94
RTL3Q8N8U3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC008264.2-201ENST00000610193 3731 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 GNG5P1-201ENST00000255500 204 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 FTLP6-201ENST00000355274 422 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 U3.4-201ENST00000363352 213 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 SNORD56.5-201ENST00000364281 72 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 RNU6-769P-201ENST00000384407 104 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 MIR512-1-201ENST00000384913 84 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 HMGB1P11-201ENST00000413899 637 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.94□□□□□ -1.94
RTL3Q8N8U3 AC009296.1-201ENST00000443146 155 ntBASIC2.94□□□□□ -1.94
RTL3Q8N8U3 ELOCP30-201ENST00000447108 299 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms