Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC079809.1-201ENST00000415468 276 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 RPL7P49-201ENST00000471402 708 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AP000797.2-201ENST00000475768 606 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AC091144.1-201ENST00000519573 138 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 CBX3P4-201ENST00000538909 354 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 FAM60BP-201ENST00000578364 658 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 RN7SL356P-201ENST00000582228 248 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 BX284668.6-201ENST00000606899 438 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AC009318.2-201ENST00000610917 651 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AL360181.4-201ENST00000621752 134 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 uc_338.7-201ENST00000621834 124 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 PCAT14-202ENST00000627127 3935 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 MIR613-201ENST00000385248 95 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 MIR1182-201ENST00000408363 97 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AL117339.3-201ENST00000418733 162 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AC091390.3-201ENST00000426478 338 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 RPL23AP25-201ENST00000430973 463 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 RPL34P20-201ENST00000442771 351 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 RN7SL41P-201ENST00000476144 297 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 RPL23AP45-201ENST00000476406 468 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 RPS29P26-201ENST00000477483 171 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AC067942.3-201ENST00000512025 362 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 RN7SKP122-201ENST00000515923 296 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AP004371.1-201ENST00000525240 214 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 MIR7853-201ENST00000584820 132 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 MZT1P2-201ENST00000604387 248 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF135Q8IUD6 AC068724.3-201ENST00000625906 87 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 MIR6830-201ENST00000636015 70 ntBASIC5.4□□□□□ -1.54
RNF135Q8IUD6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
RNF135Q8IUD6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 RNA5SP388-201ENST00000362584 119 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 SNORD50.1-201ENST00000362987 71 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 Y_RNA.122-201ENST00000363331 96 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 RNU6-704P-201ENST00000364162 103 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 SNORD14B-201ENST00000364533 90 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 SNORA48.7-201ENST00000391302 135 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AC004975.1-201ENST00000428733 208 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 NUTF2P7-201ENST00000453086 375 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AL136097.1-201ENST00000456945 913 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 RPL7AP28-201ENST00000464513 571 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AC107393.1-201ENST00000512403 346 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AC087441.2-201ENST00000529141 262 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AP002392.1-201ENST00000537692 208 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AC103996.1-201ENST00000555468 102 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AC006077.1-201ENST00000604746 343 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 AL391358.1-201ENST00000605342 190 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 RLIMP1-201ENST00000339626 1680 ntBASIC5.39□□□□□ -1.55
RNF135Q8IUD6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF135Q8IUD6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms