Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC092423.1-201ENST00000430165 186 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 OR2AQ1P-201ENST00000451972 200 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC079168.2-201ENST00000453977 416 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 LINC01399-202ENST00000458450 244 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 RNU7-169P-201ENST00000459456 61 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 HMGN2P13-201ENST00000476476 274 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 OR7H2P-201ENST00000513483 306 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 RNU1-6P-201ENST00000516290 144 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 ATP5F1P5-201ENST00000526403 760 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 RRN3P3-201ENST00000549207 578 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 EDDM3DP-201ENST00000554692 434 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC105129.1-201ENST00000560250 297 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AL355877.2-201ENST00000603670 358 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AL391358.1-201ENST00000605342 190 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC123912.5-201ENST00000605470 343 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 MIR1244-1-201ENST00000612829 85 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 MIR1244-3-201ENST00000635744 85 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 MIR1244-2-201ENST00000636449 85 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 MIR1244-4-202ENST00000636813 85 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 AC116096.1-201ENST00000566804 2314 ntBASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBE3DQ7Z6J8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 ZFRP1-201ENST00000457579 2970 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 SNORA74A-201ENST00000364089 198 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 RNY3P11-201ENST00000364153 102 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 UBBP2-201ENST00000376781 231 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 MIR550A3-201ENST00000390735 95 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC005154.2-201ENST00000438110 379 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC004383.1-201ENST00000438135 289 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 RPEP5-201ENST00000441137 268 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 IFNWP4-201ENST00000453148 294 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-138P-201ENST00000515952 107 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 RN7SKP276-201ENST00000516242 268 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC109479.2-201ENST00000517842 174 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC084851.1-201ENST00000529105 249 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 MIR3667-201ENST00000581025 74 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC002545.1-201ENST00000592511 181 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC098826.3-201ENST00000603823 466 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 RNA5SP108-201ENST00000605921 117 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 FAM25E-202ENST00000608562 189 ntBASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
UBE3DQ7Z6J8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC025031.4-201ENST00000621248 3271 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 ASNSP1-201ENST00000518311 1939 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 Y_RNA.26-201ENST00000362539 101 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 Y_RNA.27-201ENST00000362540 103 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-1317P-201ENST00000364582 104 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-806P-201ENST00000365147 105 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 Y_RNA.477-201ENST00000384352 108 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 EI24P1-201ENST00000416584 867 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC096920.1-201ENST00000423991 241 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 RPL21P13-201ENST00000488305 481 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 HMGB3P17-201ENST00000504195 649 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC008958.1-201ENST00000511047 682 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-397P-201ENST00000516226 104 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 Y_RNA.673-201ENST00000516306 88 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms