Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 SNORA7.4-201ENST00000384249 137 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 RN7SKP220-201ENST00000410611 288 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 Y_RNA.608-201ENST00000410647 95 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 RPS15AP12-201ENST00000419498 388 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 SEPT2P1-201ENST00000419651 180 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 MTND1P28-201ENST00000435623 950 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 UBE2D3P1-201ENST00000436669 444 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 MTND4P25-201ENST00000441039 533 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 RPS12P18-201ENST00000442381 270 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 ST13P20-201ENST00000447996 1065 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 RPL12P25-201ENST00000455592 494 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 RPS26P21-201ENST00000475397 348 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC118465.1-201ENST00000513820 1271 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 ZNF519P3-201ENST00000557158 1032 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC010653.1-201ENST00000571108 881 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC025165.5-201ENST00000602802 578 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 DPPA3P3-201ENST00000603842 430 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC027807.2-201ENST00000616099 408 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 MIR7112-201ENST00000616126 65 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 AC006338.1-201ENST00000618453 749 ntBASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NHLRC1Q6VVB1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NHLRC1Q6VVB1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
NHLRC1Q6VVB1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 Y_RNA.169-201ENST00000363745 96 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 RNU6-701P-201ENST00000384059 107 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 MIR634-201ENST00000385208 97 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 MTCYBP36-201ENST00000404146 440 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 SNORA11.2-201ENST00000408318 127 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 RNA5SP120-201ENST00000410900 112 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 OR2B8P-201ENST00000432841 938 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 UBE2D3P4-201ENST00000441973 436 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 RPL36AP51-201ENST00000487216 318 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC074250.1-201ENST00000511117 192 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC113155.1-201ENST00000511141 769 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 RNA5SP217-201ENST00000515959 91 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 SNORA31.3-201ENST00000516029 96 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 RNU7-51P-201ENST00000516560 62 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 Y_RNA.688-201ENST00000516565 95 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 RNU6-677P-201ENST00000516914 101 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AL356057.1-201ENST00000533798 831 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC011611.1-201ENST00000552179 197 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC010620.2-201ENST00000600135 313 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 BNIP3P9-201ENST00000603714 553 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AL161798.1-201ENST00000604630 131 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 YPEL5P2-201ENST00000605553 359 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC011939.3-201ENST00000613686 466 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 uc_338.25-201ENST00000613756 156 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC139792.2-201ENST00000624218 587 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC091903.1-201ENST00000624322 454 ntBASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
NHLRC1Q6VVB1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms