Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 OR5AL2P-201ENST00000532185 920 ntBASIC1.61□□□□□ -2.15
CCDC171Q6TFL3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC171Q6TFL3 AC021749.1-201ENST00000604322 607 ntBASIC1.61□□□□□ -2.15
CCDC171Q6TFL3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC171Q6TFL3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC171Q6TFL3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC171Q6TFL3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 SNORA23-201ENST00000365128 182 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AL133384.1-201ENST00000412744 351 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC004865.1-201ENST00000442276 1003 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC124916.1-201ENST00000444020 547 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AL589880.1-201ENST00000448271 287 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC004223.1-201ENST00000479840 271 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 KATNBL1P4-201ENST00000503545 918 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 PCNAP1-201ENST00000505363 709 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 RNU6-488P-201ENST00000515918 99 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 MIR5571-201ENST00000577998 113 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 MIR4529-201ENST00000578110 78 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC025588.2-201ENST00000604851 466 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AC073308.1-201ENST00000623696 305 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 ZNF702P-202ENST00000434269 1966 ntBASIC1.6□□□□□ -2.15
CCDC171Q6TFL3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
CCDC171Q6TFL3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 RNU6-1035P-201ENST00000384477 107 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 RNU6-19P-201ENST00000384718 107 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 CYCSP48-201ENST00000417124 323 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 MTCO3P46-201ENST00000425787 232 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 RPL23AP3-201ENST00000453844 468 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AC079791.1-201ENST00000605356 973 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AC011330.2-201ENST00000621680 635 ntBASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC171Q6TFL3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 RNU6-955P-201ENST00000410497 104 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 snoU109.1-201ENST00000459339 135 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 C1DP5-201ENST00000525775 383 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 CBX3P7-201ENST00000532876 502 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AC068135.2-201ENST00000569293 1028 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 MIR3660-201ENST00000584845 100 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 AC055876.5-201ENST00000605667 259 ntBASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC171Q6TFL3 RNU6-392P-201ENST00000364926 101 ntBASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 SNORA31.13-201ENST00000516624 135 ntBASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AC022616.2-201ENST00000523185 300 ntBASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AC025857.1-201ENST00000525252 377 ntBASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 MIR8070-201ENST00000616510 88 ntBASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
CCDC171Q6TFL3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 MIR126-201ENST00000362291 85 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 RNA5SP276-201ENST00000362580 94 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 RPL23AP29-201ENST00000397284 453 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AL033519.2-201ENST00000403958 392 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 RNU2-68P-201ENST00000410878 191 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AP000275.1-201ENST00000411943 390 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 Z82190.1-201ENST00000454534 490 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AC068781.1-201ENST00000488231 618 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms